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Q0DTX5

- Q0DTX5_ORYSJ

UniProt

Q0DTX5 - Q0DTX5_ORYSJ

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Protein
Superoxide dismutase [Cu-Zn]
Gene
Os03g0219200
Organism
Oryza sativa subsp. japonica (Rice)
Status
Unreviewed - Annotation score: 3 out of 5 - Protein inferred from homologyi

Functioni

Destroys radicals which are normally produced within the cells and which are toxic to biological systems By similarity.UniRule annotation

Catalytic activityi

2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

Cofactori

Binds 1 copper ion per subunit By similarity.UniRule annotation
Binds 1 zinc ion per subunit By similarity.UniRule annotation

GO - Molecular functioni

  1. copper ion binding Source: RefGenome
  2. superoxide dismutase activity Source: RefGenome
  3. zinc ion binding Source: RefGenome

GO - Biological processi

  1. cellular response to UV-B Source: EnsemblPlants/Gramene
  2. cellular response to high light intensity Source: EnsemblPlants/Gramene
  3. cellular response to ozone Source: EnsemblPlants/Gramene
  4. cellular response to salt stress Source: EnsemblPlants/Gramene
  5. removal of superoxide radicals Source: RefGenome
Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseUniRule annotation

Keywords - Ligandi

CopperUniRule annotation, Metal-bindingUniRule annotation, ZincUniRule annotation

Enzyme and pathway databases

ReactomeiREACT_175687. Detoxification of Reactive Oxygen Species.

Names & Taxonomyi

Protein namesi
Recommended name:
Superoxide dismutase [Cu-Zn]UniRule annotation (EC:1.15.1.1UniRule annotation)
Gene namesi
Name:Os03g0219200Imported
OrganismiOryza sativa subsp. japonica (Rice)
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza
ProteomesiUP000000763: Chromosome 3

Organism-specific databases

GrameneiQ0DTX5.

Subcellular locationi

GO - Cellular componenti

  1. cytoplasm Source: RefGenome
  2. vacuole Source: EnsemblPlants/Gramene
Complete GO annotation...

PTM / Processingi

Proteomic databases

PRIDEiQ0DTX5.

Family & Domainsi

Sequence similaritiesi

Belongs to the Cu-Zn superoxide dismutase family.UniRule annotation

Phylogenomic databases

KOiK04565.

Family and domain databases

Gene3Di2.60.40.200. 1 hit.
InterProiIPR018152. SOD_Cu/Zn_BS.
IPR001424. SOD_Cu_Zn_dom.
[Graphical view]
PfamiPF00080. Sod_Cu. 1 hit.
[Graphical view]
PRINTSiPR00068. CUZNDISMTASE.
SUPFAMiSSF49329. SSF49329. 1 hit.
PROSITEiPS00332. SOD_CU_ZN_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

Q0DTX5-1 [UniParc]FASTAAdd to Basket

« Hide

GKAGGLKGVA LIGGAGGNSA VAGALHFFQD PSTGYTEVRG RVTGLAPGLH    50
GFHIHSFGDT TNGCNSTGPH FNPHNKSHGA PSDDERHVGD LGNIVANKDG 100
VADIFIKDLQ ISLSGPHSIL GRAVVVHADS DDLGRGGHEL SKTTGNAGAR 150
IGCGIIGLRS AV 162
Length:162
Mass (Da):16,315
Last modified:October 17, 2006 - v1
Checksum:iA96DE3BB6CA3F4D2
GO

Non-terminal residue

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei1 – 11Imported

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AP008209 Genomic DNA. Translation: BAF11313.1.
RefSeqiNP_001049399.1. NM_001055934.1.
UniGeneiOs.4727.

Genome annotation databases

EnsemblPlantsiOS03T0219200-01; OS03T0219200-01; OS03G0219200.
GeneIDi4332082.
KEGGiosa:4332082.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AP008209 Genomic DNA. Translation: BAF11313.1 .
RefSeqi NP_001049399.1. NM_001055934.1.
UniGenei Os.4727.

3D structure databases

ModBasei Search...
MobiDBi Search...

Proteomic databases

PRIDEi Q0DTX5.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi OS03T0219200-01 ; OS03T0219200-01 ; OS03G0219200 .
GeneIDi 4332082.
KEGGi osa:4332082.

Organism-specific databases

Gramenei Q0DTX5.

Phylogenomic databases

KOi K04565.

Enzyme and pathway databases

Reactomei REACT_175687. Detoxification of Reactive Oxygen Species.

Family and domain databases

Gene3Di 2.60.40.200. 1 hit.
InterProi IPR018152. SOD_Cu/Zn_BS.
IPR001424. SOD_Cu_Zn_dom.
[Graphical view ]
Pfami PF00080. Sod_Cu. 1 hit.
[Graphical view ]
PRINTSi PR00068. CUZNDISMTASE.
SUPFAMi SSF49329. SSF49329. 1 hit.
PROSITEi PS00332. SOD_CU_ZN_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  2. "The rice annotation project database (RAP-DB): 2008 update."
    The rice annotation project (RAP)
    Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENOME REANNOTATION.
    Strain: cv. Nipponbare.

Entry informationi

Entry nameiQ0DTX5_ORYSJ
AccessioniPrimary (citable) accession number: Q0DTX5
Entry historyi
Integrated into UniProtKB/TrEMBL: October 17, 2006
Last sequence update: October 17, 2006
Last modified: September 3, 2014
This is version 60 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

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