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Q0DTX5

- Q0DTX5_ORYSJ

UniProt

Q0DTX5 - Q0DTX5_ORYSJ

Protein

Superoxide dismutase [Cu-Zn]

Gene

Os03g0219200

Organism
Oryza sativa subsp. japonica (Rice)
Status
Unreviewed - Annotation score: 3 out of 5- Protein inferred from homologyi
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    • History
      Entry version 61 (01 Oct 2014)
      Sequence version 1 (17 Oct 2006)
      Previous versions | rss
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    Functioni

    Destroys radicals which are normally produced within the cells and which are toxic to biological systems.UniRule annotation

    Catalytic activityi

    2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

    Cofactori

    Binds 1 copper ion per subunit.UniRule annotation
    Binds 1 zinc ion per subunit.UniRule annotation

    GO - Molecular functioni

    1. copper ion binding Source: RefGenome
    2. superoxide dismutase activity Source: RefGenome
    3. zinc ion binding Source: RefGenome

    GO - Biological processi

    1. cellular response to high light intensity Source: EnsemblPlants/Gramene
    2. cellular response to ozone Source: EnsemblPlants/Gramene
    3. cellular response to salt stress Source: EnsemblPlants/Gramene
    4. cellular response to UV-B Source: EnsemblPlants/Gramene
    5. removal of superoxide radicals Source: RefGenome

    Keywords - Molecular functioni

    OxidoreductaseUniRule annotation

    Keywords - Ligandi

    CopperUniRule annotation, Metal-bindingUniRule annotation, ZincUniRule annotation

    Enzyme and pathway databases

    ReactomeiREACT_175687. Detoxification of Reactive Oxygen Species.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Superoxide dismutase [Cu-Zn]UniRule annotation (EC:1.15.1.1UniRule annotation)
    Gene namesi
    Name:Os03g0219200Imported
    OrganismiOryza sativa subsp. japonica (Rice)Imported
    Taxonomic identifieri39947 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza
    ProteomesiUP000000763: Chromosome 3

    Organism-specific databases

    GrameneiQ0DTX5.

    Subcellular locationi

    GO - Cellular componenti

    1. cytoplasm Source: RefGenome
    2. vacuole Source: EnsemblPlants/Gramene

    PTM / Processingi

    Proteomic databases

    PRIDEiQ0DTX5.

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the Cu-Zn superoxide dismutase family.UniRule annotation

    Phylogenomic databases

    KOiK04565.

    Family and domain databases

    Gene3Di2.60.40.200. 1 hit.
    InterProiIPR018152. SOD_Cu/Zn_BS.
    IPR001424. SOD_Cu_Zn_dom.
    [Graphical view]
    PfamiPF00080. Sod_Cu. 1 hit.
    [Graphical view]
    PRINTSiPR00068. CUZNDISMTASE.
    SUPFAMiSSF49329. SSF49329. 1 hit.
    PROSITEiPS00332. SOD_CU_ZN_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Fragment.

    Q0DTX5-1 [UniParc]FASTAAdd to Basket

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    GKAGGLKGVA LIGGAGGNSA VAGALHFFQD PSTGYTEVRG RVTGLAPGLH    50
    GFHIHSFGDT TNGCNSTGPH FNPHNKSHGA PSDDERHVGD LGNIVANKDG 100
    VADIFIKDLQ ISLSGPHSIL GRAVVVHADS DDLGRGGHEL SKTTGNAGAR 150
    IGCGIIGLRS AV 162
    Length:162
    Mass (Da):16,315
    Last modified:October 17, 2006 - v1
    Checksum:iA96DE3BB6CA3F4D2
    GO

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Non-terminal residuei1 – 11Imported

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP008209 Genomic DNA. Translation: BAF11313.1.
    RefSeqiNP_001049399.1. NM_001055934.1.
    UniGeneiOs.4727.

    Genome annotation databases

    EnsemblPlantsiOS03T0219200-01; OS03T0219200-01; OS03G0219200.
    GeneIDi4332082.
    KEGGiosa:4332082.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP008209 Genomic DNA. Translation: BAF11313.1 .
    RefSeqi NP_001049399.1. NM_001055934.1.
    UniGenei Os.4727.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Proteomic databases

    PRIDEi Q0DTX5.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi OS03T0219200-01 ; OS03T0219200-01 ; OS03G0219200 .
    GeneIDi 4332082.
    KEGGi osa:4332082.

    Organism-specific databases

    Gramenei Q0DTX5.

    Phylogenomic databases

    KOi K04565.

    Enzyme and pathway databases

    Reactomei REACT_175687. Detoxification of Reactive Oxygen Species.

    Family and domain databases

    Gene3Di 2.60.40.200. 1 hit.
    InterProi IPR018152. SOD_Cu/Zn_BS.
    IPR001424. SOD_Cu_Zn_dom.
    [Graphical view ]
    Pfami PF00080. Sod_Cu. 1 hit.
    [Graphical view ]
    PRINTSi PR00068. CUZNDISMTASE.
    SUPFAMi SSF49329. SSF49329. 1 hit.
    PROSITEi PS00332. SOD_CU_ZN_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. NipponbareImported.
    2. "The rice annotation project database (RAP-DB): 2008 update."
      The rice annotation project (RAP)
      Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
      Cited for: GENOME REANNOTATION.
      Strain: cv. NipponbareImported.

    Entry informationi

    Entry nameiQ0DTX5_ORYSJ
    AccessioniPrimary (citable) accession number: Q0DTX5
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 17, 2006
    Last sequence update: October 17, 2006
    Last modified: October 1, 2014
    This is version 61 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3