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Q0DIT2

- BGL19_ORYSJ

UniProt

Q0DIT2 - BGL19_ORYSJ

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Protein

Beta-glucosidase 19

Gene

BGLU19

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed - Annotation score: 3 out of 5- Experimental evidence at transcript leveli

Functioni

Catalytic activityi

Hydrolysis of terminal, non-reducing beta-D-glucosyl residues with release of beta-D-glucose.

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei63 – 631SubstrateBy similarity
Binding sitei163 – 1631SubstrateBy similarity
Active sitei209 – 2091Proton donorBy similarity
Binding sitei353 – 3531SubstrateBy similarity
Active sitei423 – 4231NucleophileBy similarity
Binding sitei464 – 4641SubstrateBy similarity

GO - Molecular functioni

  1. beta-glucosidase activity Source: UniProtKB-EC

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Glycosidase, Hydrolase

Protein family/group databases

CAZyiGH1. Glycoside Hydrolase Family 1.

Names & Taxonomyi

Protein namesi
Recommended name:
Beta-glucosidase 19 (EC:3.2.1.21)
Short name:
Os5bglu19
Gene namesi
Name:BGLU19
Ordered Locus Names:Os05g0365600, LOC_Os05g30250
ORF Names:OSJNBa0090H02.2, OSJNBb0111K12.10, P0683B02.14
OrganismiOryza sativa subsp. japonica (Rice)
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza
ProteomesiUP000000763: Chromosome 5

Organism-specific databases

GrameneiQ0DIT2.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 4141Sequence AnalysisAdd
BLAST
Chaini42 – 528487Beta-glucosidase 19PRO_0000390336Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Disulfide bondi228 ↔ 237By similarity
Glycosylationi236 – 2361N-linked (GlcNAc...)Sequence Analysis
Glycosylationi241 – 2411N-linked (GlcNAc...)Sequence Analysis
Glycosylationi424 – 4241N-linked (GlcNAc...)Sequence Analysis
Glycosylationi429 – 4291N-linked (GlcNAc...)Sequence Analysis

Keywords - PTMi

Disulfide bond, Glycoprotein

Expressioni

Gene expression databases

ExpressionAtlasiQ0DIT2. baseline and differential.

Structurei

3D structure databases

ProteinModelPortaliQ0DIT2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Region

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Regioni471 – 4722Substrate bindingBy similarity

Sequence similaritiesi

Belongs to the glycosyl hydrolase 1 family.Curated

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiCOG2723.
HOGENOMiHOG000088630.
InParanoidiQ0DIT2.
KOiK01188.
OMAiEATIFAF.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR001360. Glyco_hydro_1.
IPR018120. Glyco_hydro_1_AS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10353. PTHR10353. 1 hit.
PfamiPF00232. Glyco_hydro_1. 1 hit.
[Graphical view]
PRINTSiPR00131. GLHYDRLASE1.
SUPFAMiSSF51445. SSF51445. 1 hit.
PROSITEiPS00653. GLYCOSYL_HYDROL_F1_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q0DIT2-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MCGCASGEDA METRRPLHPL LLFFSPWLLL LLLLVVQGVR SLQFTRDDFP
60 70 80 90 100
DGFTFGAGTA AFQYEGAAAE DGRTPSIWDT YAHSWRNPGG ETGDVACDGY
110 120 130 140 150
HKYKEDVMLM NETGLEAYRF TISWSRLIPS GRGAVNPKGL QFYNSMINEL
160 170 180 190 200
VKAGIQIHAV LYHIDLPQSL QDEYGGWVSP KVVDDFAAYA DVCFREFGDR
210 220 230 240 250
VAHWTTSIEP NVMAQSGYDD GYLPPNRCSY PFGRSNCTLG NSTVEPYLFI
260 270 280 290 300
HHTLLAHASA VRLYREKHQA AQKGVVGMNI YSMWFYPLTE STEDIAATER
310 320 330 340 350
VKDFMYGWIL HPLVFGDYPE TMKKAAGSRL PLFSDYESEL VTNAFDFIGL
360 370 380 390 400
NHYTSNYVSD NSNAVKAPLQ DVTDDISSLF WASKNSTPTR EFLPGTSLDP
410 420 430 440 450
RGLELALEYL QEKYGNLLFY IQENGSGSNA TLDDVGRIDC LTQYIAATLR
460 470 480 490 500
SIRNGANVKG YCVWSFMDQY EMFGDYKAHF GIVAVDFGSE ELTRQPRRSA
510 520
RWYSDFLKNN AVIKVDDGSV STAFHAQL
Length:528
Mass (Da):59,279
Last modified:October 17, 2006 - v1
Checksum:iF27218C6CFE68F2C
GO

Sequence cautioni

The sequence AK105546 differs from that shown. Reason: Frameshift at position 118.
The sequence AAS79738.1 differs from that shown. Reason: Erroneous gene model prediction.
The sequence AAV31351.1 differs from that shown. Reason: Erroneous gene model prediction.
The sequence AAV32242.1 differs from that shown. Reason: Erroneous gene model prediction.

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AC121366 Genomic DNA. Translation: AAS79738.1. Sequence problems.
AC137618 Genomic DNA. Translation: AAV31351.1. Sequence problems.
AC135927 Genomic DNA. Translation: AAV32242.1. Sequence problems.
AP008211 Genomic DNA. Translation: BAF17241.1.
AK105546 mRNA. No translation available.
RefSeqiNP_001055327.1. NM_001061862.1.
UniGeneiOs.24873.

Genome annotation databases

EnsemblPlantsiOS05T0365600-01; OS05T0365600-01; OS05G0365600.
GeneIDi4338556.
KEGGiosa:4338556.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AC121366 Genomic DNA. Translation: AAS79738.1 . Sequence problems.
AC137618 Genomic DNA. Translation: AAV31351.1 . Sequence problems.
AC135927 Genomic DNA. Translation: AAV32242.1 . Sequence problems.
AP008211 Genomic DNA. Translation: BAF17241.1 .
AK105546 mRNA. No translation available.
RefSeqi NP_001055327.1. NM_001061862.1.
UniGenei Os.24873.

3D structure databases

ProteinModelPortali Q0DIT2.
ModBasei Search...
MobiDBi Search...

Protein family/group databases

CAZyi GH1. Glycoside Hydrolase Family 1.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi OS05T0365600-01 ; OS05T0365600-01 ; OS05G0365600 .
GeneIDi 4338556.
KEGGi osa:4338556.

Organism-specific databases

Gramenei Q0DIT2.

Phylogenomic databases

eggNOGi COG2723.
HOGENOMi HOG000088630.
InParanoidi Q0DIT2.
KOi K01188.
OMAi EATIFAF.

Gene expression databases

ExpressionAtlasi Q0DIT2. baseline and differential.

Family and domain databases

Gene3Di 3.20.20.80. 1 hit.
InterProi IPR001360. Glyco_hydro_1.
IPR018120. Glyco_hydro_1_AS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
PANTHERi PTHR10353. PTHR10353. 1 hit.
Pfami PF00232. Glyco_hydro_1. 1 hit.
[Graphical view ]
PRINTSi PR00131. GLHYDRLASE1.
SUPFAMi SSF51445. SSF51445. 1 hit.
PROSITEi PS00653. GLYCOSYL_HYDROL_F1_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  3. "The rice annotation project database (RAP-DB): 2008 update."
    The rice annotation project (RAP)
    Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENOME REANNOTATION.
    Strain: cv. Nipponbare.
  4. "Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice."
    The rice full-length cDNA consortium
    Science 301:376-379(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: cv. Nipponbare.
  5. "Analysis of rice glycosyl hydrolase family 1 and expression of Os4bglu12 beta-glucosidase."
    Opassiri R., Pomthong B., Onkoksoong T., Akiyama T., Esen A., Ketudat Cairns J.R.
    BMC Plant Biol. 6:33-33(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENE FAMILY, NOMENCLATURE.

Entry informationi

Entry nameiBGL19_ORYSJ
AccessioniPrimary (citable) accession number: Q0DIT2
Secondary accession number(s): Q60DY5, Q75IT1
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 15, 2009
Last sequence update: October 17, 2006
Last modified: October 29, 2014
This is version 57 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Glycosyl hydrolases
    Classification of glycosyl hydrolase families and list of entries
  2. Oryza sativa (rice)
    Index of Oryza sativa entries and their corresponding gene designations
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3