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Q0DI00

- Q0DI00_ORYSJ

UniProt

Q0DI00 - Q0DI00_ORYSJ

Protein
Submitted name:

Os05g0427800 protein

Gene

Os05g0427800

Organism
Oryza sativa subsp. japonica (Rice)
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi
  1. Functioni

    GO - Molecular functioni

    1. magnesium ion binding Source: InterPro
    2. ribulose-bisphosphate carboxylase activity Source: InterPro

    GO - Biological processi

    1. carbon fixation Source: InterPro

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Os05g0427800 proteinImported
    Gene namesi
    Ordered Locus Names:Os05g0427800Imported
    OrganismiOryza sativa subsp. japonica (Rice)Imported
    Taxonomic identifieri39947 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza
    ProteomesiUP000000763: Chromosome 5

    Organism-specific databases

    GrameneiQ0DI00.

    PTM / Processingi

    Proteomic databases

    PaxDbiQ0DI00.
    PRIDEiQ0DI00.

    Interactioni

    Protein-protein interaction databases

    STRINGi39947.LOC_Os05g35330.1.

    Structurei

    3D structure databases

    ProteinModelPortaliQ0DI00.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the RuBisCO large chain family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG1850.
    HOGENOMiHOG000119019.
    KOiK01601.
    OMAiGHIFTIS.

    Family and domain databases

    Gene3Di3.30.70.150. 1 hit.
    InterProiIPR017443. RuBisCO_lsu_fd_N.
    IPR017444. RuBisCO_lsu_N.
    [Graphical view]
    PfamiPF02788. RuBisCO_large_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF54966. SSF54966. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q0DI00-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSPQTETKAS VGFKAGVKDY KLTYYTPEYE TKDTDILAAF RITPQPGVPP    50
    EEAGAAVAAE SSTGTWTTVW TDGLTSLDRY KGRCYHIEPV VGEDNQYIAY 100
    VAYPLDLFEE GSVTNMFTSI VGNVFGFKAL RALRLEDLRI PLTYSKTF 148
    Length:148
    Mass (Da):16,441
    Last modified:October 17, 2006 - v1
    Checksum:i6CE4EF45BF771180
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP008211 Genomic DNA. Translation: BAF17523.1.
    RefSeqiNP_001055609.1. NM_001062144.1.

    Genome annotation databases

    EnsemblPlantsiOS05T0427800-00; OS05T0427800-00; OS05G0427800.
    GeneIDi4338862.
    KEGGiosa:4338862.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP008211 Genomic DNA. Translation: BAF17523.1 .
    RefSeqi NP_001055609.1. NM_001062144.1.

    3D structure databases

    ProteinModelPortali Q0DI00.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 39947.LOC_Os05g35330.1.

    Proteomic databases

    PaxDbi Q0DI00.
    PRIDEi Q0DI00.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi OS05T0427800-00 ; OS05T0427800-00 ; OS05G0427800 .
    GeneIDi 4338862.
    KEGGi osa:4338862.

    Organism-specific databases

    Gramenei Q0DI00.

    Phylogenomic databases

    eggNOGi COG1850.
    HOGENOMi HOG000119019.
    KOi K01601.
    OMAi GHIFTIS.

    Family and domain databases

    Gene3Di 3.30.70.150. 1 hit.
    InterProi IPR017443. RuBisCO_lsu_fd_N.
    IPR017444. RuBisCO_lsu_N.
    [Graphical view ]
    Pfami PF02788. RuBisCO_large_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF54966. SSF54966. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. NipponbareImported.
    2. "The rice annotation project database (RAP-DB): 2008 update."
      The rice annotation project (RAP)
      Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
      Cited for: GENOME REANNOTATION.
      Strain: cv. NipponbareImported.

    Entry informationi

    Entry nameiQ0DI00_ORYSJ
    AccessioniPrimary (citable) accession number: Q0DI00
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 17, 2006
    Last sequence update: October 17, 2006
    Last modified: October 1, 2014
    This is version 60 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3