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Q0DI00 (Q0DI00_ORYSJ) Unreviewed, UniProtKB/TrEMBL

Last modified March 19, 2014. Version 58. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Os05g0427800 EMBL BAF17523.1
OrganismOryza sativa subsp. japonica (Rice) [Reference proteome] EMBL BAF17523.1
Taxonomic identifier39947 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza

Protein attributes

Sequence length148 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the RuBisCO large chain family. RuleBase RU004228

Sequences

Sequence LengthMass (Da)Tools
Q0DI00 [UniParc].

Last modified October 17, 2006. Version 1.
Checksum: 6CE4EF45BF771180

FASTA14816,441
        10         20         30         40         50         60 
MSPQTETKAS VGFKAGVKDY KLTYYTPEYE TKDTDILAAF RITPQPGVPP EEAGAAVAAE 

        70         80         90        100        110        120 
SSTGTWTTVW TDGLTSLDRY KGRCYHIEPV VGEDNQYIAY VAYPLDLFEE GSVTNMFTSI 

       130        140 
VGNVFGFKAL RALRLEDLRI PLTYSKTF 

« Hide

References

« Hide 'large scale' references
[1]"The map-based sequence of the rice genome."
International rice genome sequencing project (IRGSP)
Nature 436:793-800(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Nipponbare.
[2]"The rice annotation project database (RAP-DB): 2008 update."
The rice annotation project (RAP)
Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: GENOME REANNOTATION.
Strain: cv. Nipponbare.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP008211 Genomic DNA. Translation: BAF17523.1.
RefSeqNP_001055609.1. NM_001062144.1.

3D structure databases

ProteinModelPortalQ0DI00.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING39947.LOC_Os05g35330.1.

Proteomic databases

PaxDbQ0DI00.
PRIDEQ0DI00.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsOS05T0427800-00; OS05T0427800-00; OS05G0427800.
GeneID4338862.
KEGGosa:4338862.

Organism-specific databases

GrameneQ0DI00.

Phylogenomic databases

eggNOGCOG1850.
HOGENOMHOG000119019.
KOK01601.
OMAEYETKDS.

Family and domain databases

Gene3D3.30.70.150. 1 hit.
InterProIPR017443. RuBisCO_lsu_fd_N.
IPR017444. RuBisCO_lsu_N.
[Graphical view]
PfamPF02788. RuBisCO_large_N. 1 hit.
[Graphical view]
SUPFAMSSF54966. SSF54966. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ0DI00_ORYSJ
AccessionPrimary (citable) accession number: Q0DI00
Entry history
Integrated into UniProtKB/TrEMBL: October 17, 2006
Last sequence update: October 17, 2006
Last modified: March 19, 2014
This is version 58 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)