Q0DI00 (Q0DI00_ORYSJ) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Os05g0427800 protein EMBL BAF17523.1

Gene names

Ordered Locus Names:

Os05g0427800 EMBL BAF17523.1

Organism

Oryza sativa subsp. japonica (Rice) [Reference proteome] EMBL BAF17523.1

Taxonomic identifier

39947 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Viridiplantae › Streptophyta › Streptophytina › Embryophyta › Tracheophyta › Euphyllophyta › Spermatophyta › Magnoliophyta › Liliopsida › commelinids › Poales › Poaceae › BEP clade › Ehrhartoideae › Oryzeae › Oryza › Oryza sativa

Protein attributes

Sequence length	148 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the RuBisCO large chain family. RuleBase RU004228

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	carbon fixation Inferred from electronic annotation. Source: InterPro response to abscisic acid stimulus Inferred from electronic annotation. Source: EnsemblPlants/Gramene response to cadmium ion Inferred from electronic annotation. Source: EnsemblPlants/Gramene
Cellular_component	apoplast Inferred from electronic annotation. Source: EnsemblPlants/Gramene cell wall Inferred from electronic annotation. Source: EnsemblPlants/Gramene chloroplast envelope Inferred from electronic annotation. Source: EnsemblPlants/Gramene chloroplast thylakoid membrane Inferred from electronic annotation. Source: EnsemblPlants/Gramene cytosolic ribosome Inferred from electronic annotation. Source: EnsemblPlants/Gramene plastoglobule Inferred from electronic annotation. Source: EnsemblPlants/Gramene
Molecular_function	magnesium ion binding Inferred from electronic annotation. Source: InterPro ribulose-bisphosphate carboxylase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q0DI00 [UniParc]. Last modified October 17, 2006. Version 1. Checksum: 6CE4EF45BF771180	FASTA	148	16,441
	10 20 30 40 50 60 MSPQTETKAS VGFKAGVKDY KLTYYTPEYE TKDTDILAAF RITPQPGVPP EEAGAAVAAE 70 80 90 100 110 120 SSTGTWTTVW TDGLTSLDRY KGRCYHIEPV VGEDNQYIAY VAYPLDLFEE GSVTNMFTSI 130 140 VGNVFGFKAL RALRLEDLRI PLTYSKTF

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"The map-based sequence of the rice genome." International rice genome sequencing project (IRGSP) Nature 436:793-800(2005) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Nipponbare.
[2]	"The rice annotation project database (RAP-DB): 2008 update." The rice annotation project (RAP) Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract] Cited for: GENOME REANNOTATION. Strain: cv. Nipponbare.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AP008211 Genomic DNA. Translation: BAF17523.1.
RefSeq	NP_001055609.1. NM_001062144.1.
3D structure databases
ProteinModelPortal	Q0DI00.
ModBase	Search...
Protein-protein interaction databases
STRING	39947.LOC_Os05g35330.1.
Proteomic databases
PaxDb	Q0DI00.
PRIDE	Q0DI00.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblPlants	LOC_Os05g35330.1; LOC_Os05g35330.1; LOC_Os05g35330.
GeneID	4338862.
KEGG	osa:4338862.
Organism-specific databases
Gramene	Q0DI00.
Phylogenomic databases
eggNOG	COG1850.
HOGENOM	HOG000119019.
KO	K01601.
OMA	EYETKDS.
Family and domain databases
Gene3D	3.30.70.150. 1 hit.
InterPro	IPR017443. RuBisCO_lsu_fd_N. IPR017444. RuBisCO_lsu_N. [Graphical view]
Pfam	PF02788. RuBisCO_large_N. 1 hit. [Graphical view]
SUPFAM	SSF54966. RuBisCO_large. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q0DI00_ORYSJ

Accession

Primary (citable) accession number: Q0DI00

Entry history

Integrated into UniProtKB/TrEMBL:	October 17, 2006
Last sequence update:	October 17, 2006
Last modified:	May 29, 2013
This is version 52 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)