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Protein
Submitted name:

Os05g0427800 protein

Gene

Os05g0427800

Organism
Oryza sativa subsp. japonica (Rice)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. magnesium ion binding Source: InterPro
  2. ribulose-bisphosphate carboxylase activity Source: InterPro

GO - Biological processi

  1. carbon fixation Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Os05g0427800 proteinImported
Gene namesi
Ordered Locus Names:Os05g0427800Imported
OrganismiOryza sativa subsp. japonica (Rice)Imported
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza
ProteomesiUP000000763: Chromosome 5

Organism-specific databases

GrameneiQ0DI00.

PTM / Processingi

Proteomic databases

PaxDbiQ0DI00.
PRIDEiQ0DI00.

Interactioni

Protein-protein interaction databases

STRINGi39947.LOC_Os05g35330.1.

Structurei

3D structure databases

ProteinModelPortaliQ0DI00.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the RuBisCO large chain family.UniRule annotation

Phylogenomic databases

eggNOGiCOG1850.
HOGENOMiHOG000119019.
InParanoidiQ0DI00.
KOiK01601.
OMAiEYETKDS.

Family and domain databases

Gene3Di3.30.70.150. 1 hit.
InterProiIPR017443. RuBisCO_lsu_fd_N.
IPR017444. RuBisCO_lsu_N.
[Graphical view]
PfamiPF02788. RuBisCO_large_N. 1 hit.
[Graphical view]
SUPFAMiSSF54966. SSF54966. 1 hit.

Sequencei

Sequence statusi: Complete.

Q0DI00-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSPQTETKAS VGFKAGVKDY KLTYYTPEYE TKDTDILAAF RITPQPGVPP
60 70 80 90 100
EEAGAAVAAE SSTGTWTTVW TDGLTSLDRY KGRCYHIEPV VGEDNQYIAY
110 120 130 140
VAYPLDLFEE GSVTNMFTSI VGNVFGFKAL RALRLEDLRI PLTYSKTF
Length:148
Mass (Da):16,441
Last modified:October 17, 2006 - v1
Checksum:i6CE4EF45BF771180
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP008211 Genomic DNA. Translation: BAF17523.1.
RefSeqiNP_001055609.1. NM_001062144.1.

Genome annotation databases

EnsemblPlantsiOS05T0427800-00; OS05T0427800-00; OS05G0427800.
GeneIDi4338862.
KEGGiosa:4338862.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP008211 Genomic DNA. Translation: BAF17523.1.
RefSeqiNP_001055609.1. NM_001062144.1.

3D structure databases

ProteinModelPortaliQ0DI00.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi39947.LOC_Os05g35330.1.

Proteomic databases

PaxDbiQ0DI00.
PRIDEiQ0DI00.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiOS05T0427800-00; OS05T0427800-00; OS05G0427800.
GeneIDi4338862.
KEGGiosa:4338862.

Organism-specific databases

GrameneiQ0DI00.

Phylogenomic databases

eggNOGiCOG1850.
HOGENOMiHOG000119019.
InParanoidiQ0DI00.
KOiK01601.
OMAiEYETKDS.

Family and domain databases

Gene3Di3.30.70.150. 1 hit.
InterProiIPR017443. RuBisCO_lsu_fd_N.
IPR017444. RuBisCO_lsu_N.
[Graphical view]
PfamiPF02788. RuBisCO_large_N. 1 hit.
[Graphical view]
SUPFAMiSSF54966. SSF54966. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. NipponbareImported.
  2. "The rice annotation project database (RAP-DB): 2008 update."
    The rice annotation project (RAP)
    Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENOME REANNOTATION.
    Strain: cv. NipponbareImported.

Entry informationi

Entry nameiQ0DI00_ORYSJ
AccessioniPrimary (citable) accession number: Q0DI00
Entry historyi
Integrated into UniProtKB/TrEMBL: October 17, 2006
Last sequence update: October 17, 2006
Last modified: January 7, 2015
This is version 62 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.