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Q0DHL5

- LAC11_ORYSJ

UniProt

Q0DHL5 - LAC11_ORYSJ

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Protein

Putative laccase-11

Gene
LAC11, Os05g0458300, LOC_Os05g38390, OsJ_018044
Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed - Annotation score: 3 out of 5 - Protein uncertaini

Functioni

Lignin degradation and detoxification of lignin-derived products By similarity.

Catalytic activityi

4 benzenediol + O2 = 4 benzosemiquinone + 2 H2O.

Cofactori

Binds 4 copper ions per monomer By similarity.

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Metal bindingi48 – 481Copper 1 By similarity
Metal bindingi50 – 501Copper 2 By similarity
Metal bindingi93 – 931Copper 2 By similarity
Metal bindingi95 – 951Copper 3 By similarity
Metal bindingi440 – 4401Copper 4 By similarity
Metal bindingi443 – 4431Copper 1 By similarity
Metal bindingi445 – 4451Copper 3 By similarity
Metal bindingi502 – 5021Copper 3 By similarity
Metal bindingi503 – 5031Copper 4 By similarity
Metal bindingi504 – 5041Copper 2 By similarity
Metal bindingi508 – 5081Copper 4 By similarity

GO - Molecular functioni

  1. copper ion binding Source: InterPro
  2. hydroquinone:oxygen oxidoreductase activity Source: UniProtKB-EC

GO - Biological processi

  1. lignin catabolic process Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

Oxidoreductase

Keywords - Biological processi

Lignin degradation

Keywords - Ligandi

Copper, Metal-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Putative laccase-11 (EC:1.10.3.2)
Alternative name(s):
Benzenediol:oxygen oxidoreductase 11
Diphenol oxidase 11
Urishiol oxidase 11
Gene namesi
Name:LAC11
Ordered Locus Names:Os05g0458300, LOC_Os05g38390
ORF Names:OsJ_018044
OrganismiOryza sativa subsp. japonica (Rice)
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza
ProteomesiUP000000763: Chromosome 5

Organism-specific databases

GrameneiQ0DHL5.

Subcellular locationi

Secretedextracellular spaceapoplast Reviewed prediction

GO - Cellular componenti

  1. apoplast Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

Apoplast, Secreted

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 540540Putative laccase-11PRO_0000291896Add
BLAST

Structurei

3D structure databases

ProteinModelPortaliQ0DHL5.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini1 – 114114Plastocyanin-like 1Add
BLAST
Domaini124 – 279156Plastocyanin-like 2Add
BLAST
Domaini389 – 523135Plastocyanin-like 3Add
BLAST

Sequence similaritiesi

Keywords - Domaini

Repeat

Phylogenomic databases

eggNOGiCOG2132.
HOGENOMiHOG000241916.

Family and domain databases

Gene3Di2.60.40.420. 3 hits.
InterProiIPR001117. Cu-oxidase.
IPR011706. Cu-oxidase_2.
IPR011707. Cu-oxidase_3.
IPR002355. Cu_oxidase_Cu_BS.
IPR008972. Cupredoxin.
IPR017761. Laccase.
[Graphical view]
PfamiPF00394. Cu-oxidase. 1 hit.
PF07731. Cu-oxidase_2. 1 hit.
PF07732. Cu-oxidase_3. 1 hit.
[Graphical view]
SUPFAMiSSF49503. SSF49503. 3 hits.
TIGRFAMsiTIGR03389. laccase. 1 hit.
PROSITEiPS00079. MULTICOPPER_OXIDASE1. 1 hit.
PS00080. MULTICOPPER_OXIDASE2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q0DHL5-1 [UniParc]FASTAAdd to Basket

« Hide

MATVTRLCVT KSVPTVNGQF PGPKLVVREG DTLVIRVTNN INNNVTFHWH    50
GIRQVRSGWA DGPAYITQCP IRSGGSYVYR FTVTGQRGTL WWHAHFSWLR 100
ATLYGPLVIL PPRGVAYPFP KPHREVPLLL GEWFNADPEA VIKQALQTGG 150
GPNVSDAYTF NGLPGPTYNC SSSNDTFKLR VRPGKTYLLR LINAALNDEL 200
FFGVANHTLM VVQADASYVK PFAATALVIS PGQTMDVLLT AAANNPPSRS 250
FAIAVAPYTN TVGTFDNTTA VAVLEYYGAA TSAAALRSLP LPSLPAYNDT 300
GAVANFSASF RSLASAQYPA RVPRTVDRHF FFAVGLGADP CQSPVNGTCQ 350
GPNNTRFAAS MNNVSFVMPR TSLLQAHYQR RYNGVLAANF PAAPRTPFNY 400
TGTPPNNTFV THGTRVVPLS FNTTVEVVLQ DTSILGAESH PLHLHGYDFY 450
VVGTGFGNYD ASNDTAKYNL VDPVQRNTIS VPTAGWVAIR FVADNPGVWI 500
MHCHLDVHLS WGLSMAWLVN DGPLPNQKLP PPPSDIPMCS 540
Length:540
Mass (Da):58,622
Last modified:June 26, 2007 - v2
Checksum:iC35A55C8FA490CF7
GO

Sequence cautioni

The sequence BAF17658.1 differs from that shown. Reason: Erroneous gene model prediction.

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AP008211 Genomic DNA. Translation: BAF17658.1. Sequence problems.
CM000142 Genomic DNA. Translation: EAZ34561.1.
RefSeqiNP_001055744.1. NM_001062279.1.
UniGeneiOs.80267.

Genome annotation databases

GeneIDi4339001.
KEGGiosa:4339001.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AP008211 Genomic DNA. Translation: BAF17658.1 . Sequence problems.
CM000142 Genomic DNA. Translation: EAZ34561.1 .
RefSeqi NP_001055744.1. NM_001062279.1.
UniGenei Os.80267.

3D structure databases

ProteinModelPortali Q0DHL5.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 4339001.
KEGGi osa:4339001.

Organism-specific databases

Gramenei Q0DHL5.

Phylogenomic databases

eggNOGi COG2132.
HOGENOMi HOG000241916.

Family and domain databases

Gene3Di 2.60.40.420. 3 hits.
InterProi IPR001117. Cu-oxidase.
IPR011706. Cu-oxidase_2.
IPR011707. Cu-oxidase_3.
IPR002355. Cu_oxidase_Cu_BS.
IPR008972. Cupredoxin.
IPR017761. Laccase.
[Graphical view ]
Pfami PF00394. Cu-oxidase. 1 hit.
PF07731. Cu-oxidase_2. 1 hit.
PF07732. Cu-oxidase_3. 1 hit.
[Graphical view ]
SUPFAMi SSF49503. SSF49503. 3 hits.
TIGRFAMsi TIGR03389. laccase. 1 hit.
PROSITEi PS00079. MULTICOPPER_OXIDASE1. 1 hit.
PS00080. MULTICOPPER_OXIDASE2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  2. "The rice annotation project database (RAP-DB): 2008 update."
    The rice annotation project (RAP)
    Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENOME REANNOTATION.
    Strain: cv. Nipponbare.
  3. "The genomes of Oryza sativa: a history of duplications."
    Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S., Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.
    , Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J., Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X., Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y., Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L., Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H., Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z., Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L., Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F., Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q., Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J., Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M., McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.
    PLoS Biol. 3:266-281(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.

Entry informationi

Entry nameiLAC11_ORYSJ
AccessioniPrimary (citable) accession number: Q0DHL5
Secondary accession number(s): A3B4S2
Entry historyi
Integrated into UniProtKB/Swiss-Prot: June 26, 2007
Last sequence update: June 26, 2007
Last modified: May 14, 2014
This is version 57 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Caution

Lacks the signal peptide, which is one of the conserved features of the laccases.
Could be the product of a pseudogene.

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Oryza sativa (rice)
    Index of Oryza sativa entries and their corresponding gene designations
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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