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Q0DBU3 (P2C56_ORYSJ) Reviewed, UniProtKB/Swiss-Prot

Last modified April 16, 2014. Version 58. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Probable protein phosphatase 2C 56

Short name=OsPP2C56
EC=3.1.3.16
Gene names
Ordered Locus Names:Os06g0526800, Os06g0526950, LOC_Os06g33549
ORF Names:OsJ_020684, OSJNBa0043B22.28, P0001B01.8
OrganismOryza sativa subsp. japonica (Rice) [Reference proteome]
Taxonomic identifier39947 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza

Protein attributes

Sequence length352 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

[a protein]-serine/threonine phosphate + H2O = [a protein]-serine/threonine + phosphate.

Cofactor

Binds 2 magnesium or manganese ions per subunit By similarity.

Sequence similarities

Belongs to the PP2C family.

Contains 1 PP2C-like domain.

Sequence caution

The sequence BAD46121.1 differs from that shown. Reason: Erroneous gene model prediction.

The sequence BAD54192.1 differs from that shown. Reason: Erroneous gene model prediction.

The sequence BAF19680.1 differs from that shown. Reason: Erroneous gene model prediction.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 352352Probable protein phosphatase 2C 56
PRO_0000363303

Regions

Domain95 – 336242PP2C-like
Compositional bias51 – 566Poly-Ser

Sites

Metal binding1321Manganese 1 By similarity
Metal binding1321Manganese 2 By similarity
Metal binding1331Manganese 1; via carbonyl oxygen By similarity
Metal binding2951Manganese 2 By similarity
Metal binding3341Manganese 2 By similarity

Sequences

Sequence LengthMass (Da)Tools
Q0DBU3 [UniParc].

Last modified February 10, 2009. Version 2.
Checksum: 788CB04D163C7F43

FASTA35237,812
        10         20         30         40         50         60 
MARAAGLRAL VGIEAAGRGR RVAASPSPGG TPAASRGLPG WPGFCGVGCG SSSSSSFAPP 

        70         80         90        100        110        120 
RMQARRAAGS AARTRSPSQS NGWITGGSAS EDGRLSWDYS SFKGRRPSME DRFSIKMTTI 

       130        140        150        160        170        180 
NEQTVSLFGV FDGHGGSLAA EYLKEHLFEN LVNHPELLRD TKLAISQTFL KTDADFLESV 

       190        200        210        220        230        240 
SSNPFRDDGS TAVTAILVGN HLYVGNVGDS RVVALKAGKA VPLSEDHKPN RKDEQKRIED 

       250        260        270        280        290        300 
AGGIVVFDDT WRVNGLLAMS RAFGNRALKH YVKAEPDIQE KVVDESLEYL ILATDGLWDV 

       310        320        330        340        350 
MRNEDAVSLL KAQDGPKAAA MKLTEVAHSR LTLDNITCIV LQFHHGKSTN SN 

« Hide

References

« Hide 'large scale' references
[1]"The map-based sequence of the rice genome."
International rice genome sequencing project (IRGSP)
Nature 436:793-800(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Nipponbare.
[2]"The rice annotation project database (RAP-DB): 2008 update."
The rice annotation project (RAP)
Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: GENOME REANNOTATION.
Strain: cv. Nipponbare.
[3]"The genomes of Oryza sativa: a history of duplications."
Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S., Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L. expand/collapse author list , Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J., Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X., Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y., Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L., Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H., Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z., Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L., Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F., Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q., Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J., Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M., McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.
PLoS Biol. 3:266-281(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Nipponbare.
[4]"Genome-wide and expression analysis of protein phosphatase 2C in rice and Arabidopsis."
Xue T., Wang D., Zhang S., Ehlting J., Ni F., Jacab S., Zheng C., Zhong Y.
BMC Genomics 9:550-550(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: GENE FAMILY, NOMENCLATURE.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP005470 Genomic DNA. Translation: BAD46121.1. Sequence problems.
AP004745 Genomic DNA. Translation: BAD54192.1. Sequence problems.
AP008212 Genomic DNA. Translation: BAF19680.1. Sequence problems.
CM000143 Genomic DNA. No translation available.
RefSeqNP_001057766.1. NM_001064301.1.
NP_001174830.1. NM_001187901.1.
UniGeneOs.27037.

3D structure databases

ProteinModelPortalQ0DBU3.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsOS06T0526800-00; OS06T0526800-00; OS06G0526800.
GeneID4341188.
9270577.
KEGGosa:4341188.
osa:9270577.

Organism-specific databases

GrameneQ0DBU3.

Phylogenomic databases

eggNOGCOG0631.
HOGENOMHOG000233896.
OMAKMTTINE.

Family and domain databases

Gene3D3.60.40.10. 1 hit.
InterProIPR001932. PP2C-like_dom.
IPR000222. PP2C_Mn2_Asp60_BS.
IPR015655. Protein_Pase_2C.
[Graphical view]
PANTHERPTHR13832. PTHR13832. 1 hit.
PfamPF00481. PP2C. 1 hit.
[Graphical view]
SMARTSM00331. PP2C_SIG. 1 hit.
SM00332. PP2Cc. 1 hit.
[Graphical view]
SUPFAMSSF81606. SSF81606. 1 hit.
PROSITEPS01032. PP2C. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameP2C56_ORYSJ
AccessionPrimary (citable) accession number: Q0DBU3
Secondary accession number(s): Q652Z6
Entry history
Integrated into UniProtKB/Swiss-Prot: February 10, 2009
Last sequence update: February 10, 2009
Last modified: April 16, 2014
This is version 58 of the entry and version 2 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Oryza sativa (rice)

Index of Oryza sativa entries and their corresponding gene designations