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Q0DB64

- Q0DB64_ORYSJ

UniProt

Q0DB64 - Q0DB64_ORYSJ

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Protein
Submitted name:

Os06g0598500 protein

Gene

Os06g0598500

Organism
Oryza sativa subsp. japonica (Rice)
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. magnesium ion binding Source: InterPro
  2. ribulose-bisphosphate carboxylase activity Source: InterPro

GO - Biological processi

  1. carbon fixation Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Os06g0598500 proteinImported
Gene namesi
Ordered Locus Names:Os06g0598500Imported
OrganismiOryza sativa subsp. japonica (Rice)Imported
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza
ProteomesiUP000000763: Chromosome 6

Organism-specific databases

GrameneiQ0DB64.

Interactioni

Protein-protein interaction databases

STRINGi39947.LOC_Os06g39754.1.

Structurei

3D structure databases

ProteinModelPortaliQ0DB64.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the RuBisCO large chain family.UniRule annotation

Phylogenomic databases

InParanoidiQ0DB64.
KOiK01601.

Family and domain databases

Gene3Di3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProiIPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
IPR017444. RuBisCO_lsu_N.
[Graphical view]
PfamiPF00016. RuBisCO_large. 1 hit.
PF02788. RuBisCO_large_N. 1 hit.
[Graphical view]
SUPFAMiSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.

Sequencei

Sequence statusi: Complete.

Q0DB64-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MSPQTETKAS VGFKAGVKDY KLTYYTPEYE TKDTDILAAF RVTPQPGVPP
60 70 80 90 100
EEAGAAVAAE SSTGTCEEMI KRAVFARELG VPIVMHDYLT GGFTANTSLA
110 120 130 140 150
HYCRDNGLLL HIHRAMHAVI DRQKNHGMHF RVLAKALRMS GGDHIHAGTV
160 170 180 190 200
VGKLEGERDM TLGFVDLLRD DFIEKDRARG IFFTQDWVSM PGVIPVASGG
210 220 230 240 250
IHVWHMPALT EIFGDDSVLQ FGGGTLGHPW GNAPGAAANR VALEACVQAR
260 270
NKGAILLVKV MKLSDQLANG VLN
Length:273
Mass (Da):29,536
Last modified:October 13, 2009 - v2
Checksum:i665EDFA1623D4BD0
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AP008212 Genomic DNA. Translation: BAF19909.2.
RefSeqiNP_001057995.2. NM_001064530.2.
UniGeneiOs.99216.

Genome annotation databases

GeneIDi4341443.
KEGGiosa:4341443.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AP008212 Genomic DNA. Translation: BAF19909.2 .
RefSeqi NP_001057995.2. NM_001064530.2.
UniGenei Os.99216.

3D structure databases

ProteinModelPortali Q0DB64.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 39947.LOC_Os06g39754.1.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 4341443.
KEGGi osa:4341443.

Organism-specific databases

Gramenei Q0DB64.

Phylogenomic databases

InParanoidi Q0DB64.
KOi K01601.

Family and domain databases

Gene3Di 3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProi IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
IPR017444. RuBisCO_lsu_N.
[Graphical view ]
Pfami PF00016. RuBisCO_large. 1 hit.
PF02788. RuBisCO_large_N. 1 hit.
[Graphical view ]
SUPFAMi SSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. NipponbareImported.
  2. "The rice annotation project database (RAP-DB): 2008 update."
    The rice annotation project (RAP)
    Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENOME REANNOTATION.
    Strain: cv. NipponbareImported.

Entry informationi

Entry nameiQ0DB64_ORYSJ
AccessioniPrimary (citable) accession number: Q0DB64
Entry historyi
Integrated into UniProtKB/TrEMBL: October 17, 2006
Last sequence update: October 13, 2009
Last modified: October 29, 2014
This is version 56 of the entry and version 2 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3