Q0DB64 (Q0DB64_ORYSJ) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Os06g0598500 protein EMBL BAF19909.2

Gene names

Ordered Locus Names:

Os06g0598500 EMBL BAF19909.2

Organism

Oryza sativa subsp. japonica (Rice) [Reference proteome] EMBL BAF19909.2

Taxonomic identifier

39947 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Viridiplantae › Streptophyta › Streptophytina › Embryophyta › Tracheophyta › Euphyllophyta › Spermatophyta › Magnoliophyta › Liliopsida › commelinids › Poales › Poaceae › BEP clade › Ehrhartoideae › Oryzeae › Oryza › Oryza sativa

Protein attributes

Sequence length	273 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the RuBisCO large chain family. RuleBase RU004228

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	carbon fixation Inferred from electronic annotation. Source: InterPro
Molecular_function	magnesium ion binding Inferred from electronic annotation. Source: InterPro ribulose-bisphosphate carboxylase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q0DB64 [UniParc]. Last modified October 13, 2009. Version 2. Checksum: 665EDFA1623D4BD0	FASTA	273	29,536
	10 20 30 40 50 60 MSPQTETKAS VGFKAGVKDY KLTYYTPEYE TKDTDILAAF RVTPQPGVPP EEAGAAVAAE 70 80 90 100 110 120 SSTGTCEEMI KRAVFARELG VPIVMHDYLT GGFTANTSLA HYCRDNGLLL HIHRAMHAVI 130 140 150 160 170 180 DRQKNHGMHF RVLAKALRMS GGDHIHAGTV VGKLEGERDM TLGFVDLLRD DFIEKDRARG 190 200 210 220 230 240 IFFTQDWVSM PGVIPVASGG IHVWHMPALT EIFGDDSVLQ FGGGTLGHPW GNAPGAAANR 250 260 270 VALEACVQAR NKGAILLVKV MKLSDQLANG VLN

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"The map-based sequence of the rice genome." International rice genome sequencing project (IRGSP) Nature 436:793-800(2005) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Nipponbare.
[2]	"The rice annotation project database (RAP-DB): 2008 update." The rice annotation project (RAP) Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract] Cited for: GENOME REANNOTATION. Strain: cv. Nipponbare.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AP008212 Genomic DNA. Translation: BAF19909.2.
RefSeq	NP_001057995.2. NM_001064530.2.
UniGene	Os.99216.
3D structure databases
ProteinModelPortal	Q0DB64.
ModBase	Search...
Protein-protein interaction databases
STRING	39947.LOC_Os06g39754.1.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4341443.
KEGG	osa:4341443.
Organism-specific databases
Gramene	Q0DB64.
Phylogenomic databases
KO	K01601.
ProtClustDB	CLSN2696277.
Family and domain databases
Gene3D	3.20.20.110. 1 hit. 3.30.70.150. 1 hit.
InterPro	IPR000685. RuBisCO_lsu_C. IPR017443. RuBisCO_lsu_fd_N. IPR017444. RuBisCO_lsu_N. [Graphical view]
Pfam	PF00016. RuBisCO_large. 1 hit. PF02788. RuBisCO_large_N. 1 hit. [Graphical view]
SUPFAM	SSF51649. RuBisCO_large. 1 hit. SSF54966. RuBisCO_large. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q0DB64_ORYSJ

Accession

Primary (citable) accession number: Q0DB64

Entry history

Integrated into UniProtKB/TrEMBL:	October 17, 2006
Last sequence update:	October 13, 2009
Last modified:	May 1, 2013
This is version 49 of the entry and version 2 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)