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Q0DB64 (Q0DB64_ORYSJ) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 54. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Os06g0598500 EMBL BAF19909.2
OrganismOryza sativa subsp. japonica (Rice) [Reference proteome] EMBL BAF19909.2
Taxonomic identifier39947 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza

Protein attributes

Sequence length273 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the RuBisCO large chain family. RuleBase RU004228

Sequences

Sequence LengthMass (Da)Tools
Q0DB64 [UniParc].

Last modified October 13, 2009. Version 2.
Checksum: 665EDFA1623D4BD0

FASTA27329,536
        10         20         30         40         50         60 
MSPQTETKAS VGFKAGVKDY KLTYYTPEYE TKDTDILAAF RVTPQPGVPP EEAGAAVAAE 

        70         80         90        100        110        120 
SSTGTCEEMI KRAVFARELG VPIVMHDYLT GGFTANTSLA HYCRDNGLLL HIHRAMHAVI 

       130        140        150        160        170        180 
DRQKNHGMHF RVLAKALRMS GGDHIHAGTV VGKLEGERDM TLGFVDLLRD DFIEKDRARG 

       190        200        210        220        230        240 
IFFTQDWVSM PGVIPVASGG IHVWHMPALT EIFGDDSVLQ FGGGTLGHPW GNAPGAAANR 

       250        260        270 
VALEACVQAR NKGAILLVKV MKLSDQLANG VLN 

« Hide

References

« Hide 'large scale' references
[1]"The map-based sequence of the rice genome."
International rice genome sequencing project (IRGSP)
Nature 436:793-800(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Nipponbare.
[2]"The rice annotation project database (RAP-DB): 2008 update."
The rice annotation project (RAP)
Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: GENOME REANNOTATION.
Strain: cv. Nipponbare.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP008212 Genomic DNA. Translation: BAF19909.2.
RefSeqNP_001057995.2. NM_001064530.2.
UniGeneOs.99216.

3D structure databases

ProteinModelPortalQ0DB64.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING39947.LOC_Os06g39754.1.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4341443.
KEGGosa:4341443.

Organism-specific databases

GrameneQ0DB64.

Phylogenomic databases

KOK01601.

Family and domain databases

Gene3D3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProIPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
IPR017444. RuBisCO_lsu_N.
[Graphical view]
PfamPF00016. RuBisCO_large. 1 hit.
PF02788. RuBisCO_large_N. 1 hit.
[Graphical view]
SUPFAMSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ0DB64_ORYSJ
AccessionPrimary (citable) accession number: Q0DB64
Entry history
Integrated into UniProtKB/TrEMBL: October 17, 2006
Last sequence update: October 13, 2009
Last modified: May 14, 2014
This is version 54 of the entry and version 2 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)