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Q0C677 (Q0C677_HYPNA) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 31. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=5.1.3.8 EMBL ABI78402.1
Gene names
Ordered Locus Names:HNE_0032
OrganismHyphomonas neptunium (strain ATCC 15444) [Complete proteome] [HAMAP] EMBL ABI78402.1
Taxonomic identifier228405 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhodobacteralesHyphomonadaceaeHyphomonas

Protein attributes

Sequence length380 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
Q0C677 [UniParc].

Last modified October 17, 2006. Version 1.
Checksum: 53613CB378CDAF16

FASTA38040,976
        10         20         30         40         50         60 
MSVSALQRRA REARCWLLDS CFPLWADHGV NEAGLFPESL TTSLDEAPAE YTRVRVQARQ 

        70         80         90        100        110        120 
TYVFSEAWRL GWKRDTAAKL VNAGVATLAG RALNAQGLAG RTLSTSSGHL VDVTSDLYDT 

       130        140        150        160        170        180 
AFVLFSLAEA ARGPGPAEPA MAAAQGILMN LEKSARDAAQ GGYAETLPPP AHRQQNPHMH 

       190        200        210        220        230        240 
LLEACLALHA VQPDGGHMAR AQELIDLFET KLTAGPNGLL GEHFAPDWSP LPGDPGRIVE 

       250        260        270        280        290        300 
PGHQFEWVWL LHAYARQAGE PVSPAAERLY TFALTTLDVE GRAILSAARG GAPIDASRRA 

       310        320        330        340        350        360 
WPQTEALKAH LAMLEARRDD RYAAAACRSF DILMDEHLTE DGGWIDHIGA DGAVVSNAIP 

       370        380 
ASTGYHVVLA FAELIRVMNA 

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References

[1]"Comparative genomic evidence for a close relationship between the dimorphic prosthecate bacteria Hyphomonas neptunium and Caulobacter crescentus."
Badger J.H., Hoover T.R., Brun Y.V., Weiner R.M., Laub M.T., Alexandre G., Mrazek J., Ren Q., Paulsen I.T., Nelson K.E., Khouri H.M., Radune D., Sosa J., Dodson R.J., Sullivan S.A., Rosovitz M.J., Madupu R., Brinkac L.M. expand/collapse author list , Durkin A.S., Daugherty S.C., Kothari S.P., Giglio M.G., Zhou L., Haft D.H., Selengut J.D., Davidsen T.M., Yang Q., Zafar N., Ward N.L.
J. Bacteriol. 188:6841-6850(2006) [PubMed: 16980487] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000158 Genomic DNA. Translation: ABI78402.1.
RefSeqYP_758766.1. NC_008358.1.

3D structure databases

ProteinModelPortalQ0C677.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ0C677.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4289986.
GenomeReviewsGene locus HNE_0032 in contig CP000158_GR.
KEGGhne:HNE_0032.
NMPDRfig|228405.5.peg.32.
PATRIC32212848. VBIHypNep17450_0032.
TIGRHNE_0032.

Phylogenomic databases

eggNOGCOG2942.
HOGENOMHBG624940.
OMAPASSFYH.

Family and domain databases

InterProIPR008928. 6-hairpin_glycosidase-like.
IPR012341. 6hp_glycosidase.
IPR010819. AGE/RnBP.
[Graphical view]
Gene3DG3DSA:1.50.10.10. CelA/Cel48F_cat. 1 hit.
PfamPF07221. GlcNAc_2-epim. 1 hit.
[Graphical view]
SUPFAMSSF48208. Glyco_trans_6hp. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ0C677_HYPNA
AccessionPrimary (citable) accession number: Q0C677
Entry history
Integrated into UniProtKB/TrEMBL: October 17, 2006
Last sequence update: October 17, 2006
Last modified: December 14, 2011
This is version 31 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)