Q0C580 (Q0C580_HYPNA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative alpha-L-fucosidase EMBL ABI78331.1

Gene names

Ordered Locus Names:

HNE_0383

Organism

Hyphomonas neptunium (strain ATCC 15444) [Complete proteome] [HAMAP] EMBL ABI78331.1

Taxonomic identifier

228405 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhodobacterales › Hyphomonadaceae › Hyphomonas

Protein attributes

Sequence length	374 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	fucose metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	alpha-L-fucosidase activity Inferred from electronic annotation. Source: InterPro cation binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q0C580 [UniParc]. Last modified October 17, 2006. Version 1. Checksum: 2ECDB1C622BC77FF	FASTA	374	42,706
	10 20 30 40 50 60 MIGPNGRPCP EWFAKPQLGI FIHWGMFTIP AWAPRGRAIH ELHGDDYYMS AVMTPYSEWY 70 80 90 100 110 120 DNAVRVEGSE TRKRHKELYG DKPYAEFRPE FDALSQKFDA NEWADFFVEC GATHCVFVTK 130 140 150 160 170 180 HHDGYCLWPT EIENPHRPGW HSERDFVGEL ADAVRARGLR FGLYYSGGLD WTFRDTPIAN 190 200 210 220 230 240 MGDMFAAVPT EEDYRQYALA QAKELIDRYK PSIFWNDICW PNAADVPVLL DYYYKAVPDG 250 260 270 280 290 300 VTNDRWFASE DFFNALRDPA TLKGFNDTMK ERSAGGQQEE TPAPFADYRC VEFGLGVVPK 310 320 330 340 350 360 EHKWEACRGL GLGFGYNSAE IPEDYMSSEE VIDLYKHVTS KRGNLLINIG PLADGSIPDL 370 QKVPLRALGQ HLKS

References

[1]

"Comparative genomic evidence for a close relationship between the dimorphic prosthecate bacteria Hyphomonas neptunium and Caulobacter crescentus." Badger J.H., Hoover T.R., Brun Y.V., Weiner R.M., Laub M.T., Alexandre G., Mrazek J., Ren Q., Paulsen I.T., Nelson K.E., Khouri H.M., Radune D., Sosa J., Dodson R.J., Sullivan S.A., Rosovitz M.J., Madupu R., Brinkac L.M. , Durkin A.S., Daugherty S.C., Kothari S.P., Giglio M.G., Zhou L., Haft D.H., Selengut J.D., Davidsen T.M., Yang Q., Zafar N., Ward N.L. J. Bacteriol. 188:6841-6850(2006) [PubMed: 16980487] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000158 Genomic DNA. Translation: ABI78331.1.
RefSeq	YP_759113.1. NC_008358.1.
3D structure databases
ProteinModelPortal	Q0C580.
ModBase	Search...
Protein-protein interaction databases
STRING	Q0C580.
Protein family/group databases
CAZy	GH29. Glycoside Hydrolase Family 29.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4288824.
GenomeReviews	Gene locus HNE_0383 in contig CP000158_GR.
KEGG	hne:HNE_0383.
NMPDR	fig|228405.5.peg.377.
PATRIC	32213562. VBIHypNep17450_0386.
TIGR	HNE_0383.
Phylogenomic databases
eggNOG	COG3669.
HOGENOM	HBG515484.
OMA	STHELIK.
ProtClustDB	CLSK2317037.
Family and domain databases
InterPro	IPR000933. Glyco_hydro_29. IPR016286. Glyco_hydro_29_sub. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. [Graphical view]
Gene3D	G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
KO	K01206.
PANTHER	PTHR10030. Glyco_hydro_29. 1 hit.
Pfam	PF01120. Alpha_L_fucos. 1 hit. [Graphical view]
PRINTS	PR00741. GLHYDRLASE29.
SMART	SM00812. Alpha_L_fucos. 1 hit. [Graphical view]
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q0C580_HYPNA

Accession

Primary (citable) accession number: Q0C580

Entry history

Integrated into UniProtKB/TrEMBL:	October 17, 2006
Last sequence update:	October 17, 2006
Last modified:	December 14, 2011
This is version 37 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)