Q0C518 (Q0C518_HYPNA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Glycosyl hydrolase, family 25 EMBL ABI77169.1

Gene names

Ordered Locus Names:

HNE_0445

Organism

Hyphomonas neptunium (strain ATCC 15444) [Complete proteome] [HAMAP] EMBL ABI77169.1

Taxonomic identifier

228405 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhodobacterales › Hyphomonadaceae › Hyphomonas

Protein attributes

Sequence length	224 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Hydrolase EMBL ABI77169.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	cell wall macromolecule catabolic process Inferred from electronic annotation. Source: InterPro peptidoglycan catabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	cation binding Inferred from electronic annotation. Source: InterPro lysozyme activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q0C518 [UniParc]. Last modified October 17, 2006. Version 1. Checksum: 28C4CE9EAC5CD922	FASTA	224	24,806
	10 20 30 40 50 60 MKVRVRRLFM LTTLVLLASC GPSSAPVEDV DTFSFAPGAE GLDLSHHNGA VDWPRLSTAG 70 80 90 100 110 120 LSFVYLKATE GEGHVDTRFQ ENWLGAWRHH WQAGAYHFYL LCQDGRRQAD NFIRQVEVRS 130 140 150 160 170 180 GALPPAVDLE HAHNCAPQNS RGETLADLKV FLAALEAEYG AVPVIYTTPA FHAEWLAGEG 190 200 210 220 FDAHPLWVRS LEGPPRLPYA IWQYSMKGRV PGVTGNVDLN RAAE

References

[1]

"Comparative genomic evidence for a close relationship between the dimorphic prosthecate bacteria Hyphomonas neptunium and Caulobacter crescentus." Badger J.H., Hoover T.R., Brun Y.V., Weiner R.M., Laub M.T., Alexandre G., Mrazek J., Ren Q., Paulsen I.T., Nelson K.E., Khouri H.M., Radune D., Sosa J., Dodson R.J., Sullivan S.A., Rosovitz M.J., Madupu R., Brinkac L.M. , Durkin A.S., Daugherty S.C., Kothari S.P., Giglio M.G., Zhou L., Haft D.H., Selengut J.D., Davidsen T.M., Yang Q., Zafar N., Ward N.L. J. Bacteriol. 188:6841-6850(2006) [PubMed: 16980487] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000158 Genomic DNA. Translation: ABI77169.1.
RefSeq	YP_759175.1. NC_008358.1.
3D structure databases
ProteinModelPortal	Q0C518.
ModBase	Search...
Protein-protein interaction databases
STRING	Q0C518.
Protein family/group databases
CAZy	GH25. Glycoside Hydrolase Family 25.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4289726.
GenomeReviews	Gene locus HNE_0445 in contig CP000158_GR.
KEGG	hne:HNE_0445.
NMPDR	fig|228405.5.peg.438.
PATRIC	32213682. VBIHypNep17450_0446.
TIGR	HNE_0445.
Phylogenomic databases
eggNOG	COG3757.
HOGENOM	HBG580490.
OMA	YYFCSSA.
PhylomeDB	Q0C518.
Family and domain databases
InterPro	IPR002053. Glyco_hydro_25. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. [Graphical view]
Gene3D	G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
KO	K07273.
Pfam	PF01183. Glyco_hydro_25. 1 hit. [Graphical view]
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q0C518_HYPNA

Accession

Primary (citable) accession number: Q0C518

Entry history

Integrated into UniProtKB/TrEMBL:	October 17, 2006
Last sequence update:	October 17, 2006
Last modified:	December 14, 2011
This is version 34 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)