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Q0BYP8

- SYR_HYPNA

UniProt

Q0BYP8 - SYR_HYPNA

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Protein

Arginine--tRNA ligase

Gene

argS

Organism
Hyphomonas neptunium (strain ATCC 15444)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Catalytic activityi

ATP + L-arginine + tRNA(Arg) = AMP + diphosphate + L-arginyl-tRNA(Arg).UniRule annotation

GO - Molecular functioni

  1. arginine-tRNA ligase activity Source: UniProtKB-HAMAP
  2. ATP binding Source: UniProtKB-HAMAP

GO - Biological processi

  1. arginyl-tRNA aminoacylation Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Aminoacyl-tRNA synthetase, Ligase

Keywords - Biological processi

Protein biosynthesis

Keywords - Ligandi

ATP-binding, Nucleotide-binding

Enzyme and pathway databases

BioCyciHNEP228405:GI69-2716-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Arginine--tRNA ligaseUniRule annotation (EC:6.1.1.19UniRule annotation)
Alternative name(s):
Arginyl-tRNA synthetaseUniRule annotation
Short name:
ArgRSUniRule annotation
Gene namesi
Name:argSUniRule annotation
Ordered Locus Names:HNE_2715
OrganismiHyphomonas neptunium (strain ATCC 15444)
Taxonomic identifieri228405 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhodobacteralesHyphomonadaceaeHyphomonas
ProteomesiUP000001959: Chromosome

Subcellular locationi

Cytoplasm UniRule annotation

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 589589Arginine--tRNA ligasePRO_1000018043Add
BLAST

Interactioni

Subunit structurei

Monomer.UniRule annotation

Protein-protein interaction databases

STRINGi228405.HNE_2715.

Structurei

3D structure databases

ProteinModelPortaliQ0BYP8.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Motif

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Motifi123 – 13311"HIGH" regionAdd
BLAST

Sequence similaritiesi

Belongs to the class-I aminoacyl-tRNA synthetase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0018.
HOGENOMiHOG000247212.
KOiK01887.
OMAiDWIIYVV.
OrthoDBiEOG6JB13C.

Family and domain databases

Gene3Di1.10.730.10. 1 hit.
3.30.1360.70. 1 hit.
3.40.50.620. 1 hit.
HAMAPiMF_00123. Arg_tRNA_synth.
InterProiIPR001278. Arg-tRNA-ligase.
IPR005148. Arg-tRNA-synth_N.
IPR008909. DALR_anticod-bd.
IPR014729. Rossmann-like_a/b/a_fold.
IPR009080. tRNAsynth_1a_anticodon-bd.
[Graphical view]
PANTHERiPTHR11956. PTHR11956. 1 hit.
PfamiPF03485. Arg_tRNA_synt_N. 1 hit.
PF05746. DALR_1. 1 hit.
PF00750. tRNA-synt_1d. 1 hit.
[Graphical view]
PRINTSiPR01038. TRNASYNTHARG.
SMARTiSM01016. Arg_tRNA_synt_N. 1 hit.
SM00836. DALR_1. 1 hit.
[Graphical view]
SUPFAMiSSF47323. SSF47323. 1 hit.
SSF55190. SSF55190. 1 hit.
TIGRFAMsiTIGR00456. argS. 1 hit.

Sequencei

Sequence statusi: Complete.

Q0BYP8-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MTSLAKNLSA AAGAAFEAMG LEARFGEVRR SDKPELADFQ CNGAMAAAKA
60 70 80 90 100
AGKNPREIAG EIAARLKEHA SVLSAEVAGP GFINLRVSDA ALSARAEHVR
110 120 130 140 150
GDAMAGAEKA ADAAVTVIDF GGANVAKPMH VGHLRSAVIG DTLQRICRFA
160 170 180 190 200
GDEVTSDVHL GDWGLQMGHL VTELYDEQPG LIYFDAAYTG PYPAEPPVTI
210 220 230 240 250
DDLGRLYPQA SNKAKADAAR NERSQKAVAE MQAGRPGYRA LLRHFIEVSI
260 270 280 290 300
EALKLDYGFL NVSFDLWKGE SDVDGLIPGL VERFKQAGLA EESDGALIVH
310 320 330 340 350
VARETDKKEM PPVMLVNSRG GTGYHTTDLA TILDRMDTLT TTPERMLYVV
360 370 380 390 400
DQRQALHFEQ VFRAAGMLGL IAEDKLEHIG FGTVNGADGK PFKTREGGVL
410 420 430 440 450
RLADLQAMAM EEAEKKLSAA NLPADMGDAE RFDVAKKVAV AALRFSDLMN
460 470 480 490 500
TRTTNYVFDL ERFTSFEGKT GPYLMYAAVR VKSVLRKAAE NGHSAGKVVV
510 520 530 540 550
TEDAERTLVL QLDGFGAALL GAREKRMPHI LCEHLYGLAQ AFSSFYAALP
560 570 580
IAAEADGEKR ASRLALADGV RHQLETGLEL LGIAVPERM
Length:589
Mass (Da):63,441
Last modified:October 17, 2006 - v1
Checksum:iBB35B7B72683BE2B
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000158 Genomic DNA. Translation: ABI76291.1.
RefSeqiYP_761395.1. NC_008358.1.

Genome annotation databases

EnsemblBacteriaiABI76291; ABI76291; HNE_2715.
GeneIDi4289313.
KEGGihne:HNE_2715.
PATRICi32218301. VBIHypNep17450_2720.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000158 Genomic DNA. Translation: ABI76291.1 .
RefSeqi YP_761395.1. NC_008358.1.

3D structure databases

ProteinModelPortali Q0BYP8.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 228405.HNE_2715.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABI76291 ; ABI76291 ; HNE_2715 .
GeneIDi 4289313.
KEGGi hne:HNE_2715.
PATRICi 32218301. VBIHypNep17450_2720.

Phylogenomic databases

eggNOGi COG0018.
HOGENOMi HOG000247212.
KOi K01887.
OMAi DWIIYVV.
OrthoDBi EOG6JB13C.

Enzyme and pathway databases

BioCyci HNEP228405:GI69-2716-MONOMER.

Family and domain databases

Gene3Di 1.10.730.10. 1 hit.
3.30.1360.70. 1 hit.
3.40.50.620. 1 hit.
HAMAPi MF_00123. Arg_tRNA_synth.
InterProi IPR001278. Arg-tRNA-ligase.
IPR005148. Arg-tRNA-synth_N.
IPR008909. DALR_anticod-bd.
IPR014729. Rossmann-like_a/b/a_fold.
IPR009080. tRNAsynth_1a_anticodon-bd.
[Graphical view ]
PANTHERi PTHR11956. PTHR11956. 1 hit.
Pfami PF03485. Arg_tRNA_synt_N. 1 hit.
PF05746. DALR_1. 1 hit.
PF00750. tRNA-synt_1d. 1 hit.
[Graphical view ]
PRINTSi PR01038. TRNASYNTHARG.
SMARTi SM01016. Arg_tRNA_synt_N. 1 hit.
SM00836. DALR_1. 1 hit.
[Graphical view ]
SUPFAMi SSF47323. SSF47323. 1 hit.
SSF55190. SSF55190. 1 hit.
TIGRFAMsi TIGR00456. argS. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 15444.

Entry informationi

Entry nameiSYR_HYPNA
AccessioniPrimary (citable) accession number: Q0BYP8
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: October 17, 2006
Last modified: October 29, 2014
This is version 58 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Aminoacyl-tRNA synthetases
    List of aminoacyl-tRNA synthetase entries
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3