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Q0BY15 (Q0BY15_HYPNA) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 41. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Fumarate hydratase, class II EMBL ABI78164.1
EC=4.2.1.2 EMBL ABI78164.1
Gene names
Name:fumC EMBL ABI78164.1
Ordered Locus Names:HNE_2950
OrganismHyphomonas neptunium (strain ATCC 15444) [Complete proteome] [HAMAP] EMBL ABI78164.1
Taxonomic identifier228405 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Alphaproteobacteria › Rhodobacterales › Hyphomonadaceae › Hyphomonas

Protein attributes

Sequence length466 AA.
Sequence statusComplete.
Protein existenceInferred from homology

Ontologies

Keywords
   Molecular functionLyase EMBL ABI78164.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processfumarate metabolic process

Inferred from electronic annotation. Source: InterPro

tricarboxylic acid cycle

Inferred from electronic annotation. Source: InterPro

   Cellular componenttricarboxylic acid cycle enzyme complex

Inferred from electronic annotation. Source: InterPro

   Molecular functionfumarate hydratase activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q0BY15 [UniParc].

Last modified October 17, 2006. Version 1.
Checksum: B3B5E574E724E5E3

FASTA46650,016
        10         20         30         40         50         60 
MAKTPTRTES DTFGPIEVEA DKYWGAQAQR SLGNFKIGWE KQPQPIVRAL GIVKKAAAEV 

        70         80         90        100        110        120 
NMAMEKMDRL VGRAIVQAAD EVIEGKLDAH FPLVVWQTGS GTQSNMNANE VISNRAIEIL 

       130        140        150        160        170        180 
NGKVGSKAPV HPNDHVNMSQ SSNDTFPTAM HIACAEQVVH KLVPALQQLQ NALNDKAQAW 

       190        200        210        220        230        240 
KDIIKIGRTH TQDATPVTLG QEFSGYAKQL ENGIKRIEMT LPMLMELAQG GTAVGTGLAS 

       250        260        270        280        290        300 
PEGFAELVAD KIAQITGLNF TSAPNKFEAL AAHDAMVMTH GAITTVAMSC FKIANDIRFL 

       310        320        330        340        350        360 
GSGPRSGLGE LALPENEPGS SIMPGKVNPT QCEALTQVCA HIHGNNAAIG FAGSQGHFEL 

       370        380        390        400        410        420 
NVFNPMMAYN FLQSVQLLAD AAVSFTENCV VGIEPRLDNI QRGLENSLML VTPLKEKYGY 

       430        440        450        460 
DLAAKVAKTA HKNGTTLKVE ALALGISEED FDAIVRPEKM IGPDPA

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References

[1]"Comparative genomic evidence for a close relationship between the dimorphic prosthecate bacteria Hyphomonas neptunium and Caulobacter crescentus."
Badger J.H., Hoover T.R., Brun Y.V., Weiner R.M., Laub M.T., Alexandre G., Mrazek J., Ren Q., Paulsen I.T., Nelson K.E., Khouri H.M., Radune D., Sosa J., Dodson R.J., Sullivan S.A., Rosovitz M.J., Madupu R., Brinkac L.M. expand/collapse author list , Durkin A.S., Daugherty S.C., Kothari S.P., Giglio M.G., Zhou L., Haft D.H., Selengut J.D., Davidsen T.M., Yang Q., Zafar N., Ward N.L.
J. Bacteriol. 188:6841-6850(2006) [PubMed: 16980487] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000158 Genomic DNA. Translation: ABI78164.1.
RefSeqYP_761628.1. NC_008358.1.

3D structure databases

ProteinModelPortalQ0BY15.
SMRQ0BY15. Positions 7-461.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ0BY15.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4287447.
GenomeReviewsGene locus HNE_2950 in contig CP000158_GR.
KEGGhne:HNE_2950.
NMPDRfig|228405.5.peg.2827.
PATRIC32218769. VBIHypNep17450_2953.
TIGRHNE_2950.

Phylogenomic databases

eggNOGCOG0114.
HOGENOMHBG284369.
OMARIEKDTM.
PhylomeDBQ0BY15.
ProtClustDBPRK00485.

Family and domain databases

HAMAPMF_00743. FumaraseC.
[Tree]
InterProIPR003031. D_crystallin.
IPR005677. Fum_hydII.
IPR018951. Fumarase_C_C.
IPR000362. Fumarate_lyase.
IPR020557. Fumarate_lyase_CS.
IPR008948. L-Aspartase-like.
IPR024083. L-Aspartase-like_N.
IPR022761. Lyase1_N.
[Graphical view]
Gene3DG3DSA:1.10.275.10. G3DSA:1.10.275.10. 1 hit.
KOK01679.
PfamPF10415. FumaraseC_C. 1 hit.
PF00206. Lyase_1. 1 hit.
[Graphical view]
PRINTSPR00145. ARGSUCLYASE.
PR00149. FUMRATELYASE.
SUPFAMSSF48557. L-Aspartase-like. 1 hit.
TIGRFAMsTIGR00979. FumC_II. 1 hit.
PROSITEPS00163. FUMARATE_LYASES. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ0BY15_HYPNA
AccessionPrimary (citable) accession number: Q0BY15
Entry history
Integrated into UniProtKB/TrEMBL: October 17, 2006
Last sequence update: October 17, 2006
Last modified: December 14, 2011
This is version 41 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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