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Q0BUC0 (Q0BUC0_GRABC) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 41. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
DNA gyrase subunit B EMBL ABI61582.1
EC=5.99.1.3 EMBL ABI61582.1
Gene names
Ordered Locus Names:GbCGDNIH1_0684
OrganismGranulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) [Complete proteome] [HAMAP] EMBL ABI61582.1
Taxonomic identifier391165 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Alphaproteobacteria › Rhodospirillales › Acetobacteraceae › Granulibacter

Protein attributes

Sequence length677 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionIsomerase EMBL ABI61582.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processDNA topological change

Inferred from electronic annotation. Source: InterPro

   Cellular componentchromosome

Inferred from electronic annotation. Source: InterPro

   Molecular functionATP binding

Inferred from electronic annotation. Source: UniProtKB-KW

DNA topoisomerase (ATP-hydrolyzing) activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q0BUC0 [UniParc].

Last modified October 17, 2006. Version 1.
Checksum: D4938D4BA17998FE

FASTA67774,528
        10         20         30         40         50         60 
MNDLFGGAKS PPPSQRGAKQ RTEMNEDDYS AKDIEVLEGL EPVRRRPGMY IGGTDENALH 

        70         80         90        100        110        120 
HLVAEILDNA MDEAVAGHAT VIDLTLDPGN TVTIRDNGRG IPIDPHPKFK NLSALEVILT 

       130        140        150        160        170        180 
TLHSGGKFAG KAYATSGGLH GVGSSVVNAL SATMEVEVAR NRVLWRQSYA RGKPMTPLIE 

       190        200        210        220        230        240 
VGAAPNRRGT QIRFTPDEEI FGRLNFSPAR LYRLCRSKAY LFRGVQIRWK CDPSLLKNSG 

       250        260        270        280        290        300 
KEDIPAEATL HFPGGLRDSL ADDIGETTLA IPQIWSGEAD MKGDGQKETQ TGGRVEWALA 

       310        320        330        340        350        360 
WLDGADGFVH SYCNTVPTPL GGTHEQGFRA ALLKGLRAWG EQRGNKRAAA ITAEDIMGSL 

       370        380        390        400        410        420 
AAKLSAFVRE PQFQGQTKEK LTSPEAVRLV ESAMRDRFDH FMAGDPAGAD NLLAYVIERA 

       430        440        450        460        470        480 
EERIRRREQK DTPRKSATRR LRLPGKLADC SSENAAETEL FLVEGDSAGG SAKQARRREN 

       490        500        510        520        530        540 
QAVLPLRGKI LNVASASADK LRQNQELKDL IEALGCGVGE RFDIARLRYG RVIIMTDADV 

       550        560        570        580        590        600 
DGAHIASLLM TFFYRELPEL VRRGHLYLAQ PPLYRLTQGA TSRYAMDDAE LDRLMKSGFK 

       610        620        630        640        650        660 
KTGKIEVSRF KGLGEMPPAI LKDTTMDPAR RVLLKVLTPP EDRVRTGELV ESLMGKKPEL 

       670 
RFQFIQDNAP RAGDLDI

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References

[1]"Genome sequence analysis of the emerging human pathogenic acetic acid bacterium Granulibacter bethesdensis."
Greenberg D.E., Porcella S.F., Zelazny A.M., Virtaneva K., Sturdevant D.E., Kupko J.J. III, Barbian K.D., Babar A., Dorward D.W., Holland S.M.
J. Bacteriol. 189:8727-8736(2007) [PubMed: 17827295] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000394 Genomic DNA. Translation: ABI61582.1.
RefSeqYP_744505.1. NC_008343.1.

3D structure databases

ProteinModelPortalQ0BUC0.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ0BUC0.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4276235.
GenomeReviewsGene locus GbCGDNIH1_0684 in contig CP000394_GR.
KEGGgbe:GbCGDNIH1_0684.
NMPDRfig|391165.8.peg.688.
PATRIC22077453. VBIGraBet83793_0716.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0187.
HOGENOMHBG304889.
OMAQARDKEF.
PhylomeDBQ0BUC0.
ProtClustDBPRK05559.

Family and domain databases

InterProIPR003594. ATPase-like_ATP-bd.
IPR020568. Ribosomal_S5_D2-typ_fold.
IPR014721. Ribosomal_S5_D2-typ_fold_subgr.
IPR001241. Topo_IIA.
IPR013759. Topo_IIA_B/N_ab.
IPR002288. Topo_IIA_B_C.
IPR013506. Topo_IIA_bsu_dom2.
IPR013760. Topo_IIA_cen.
IPR018522. TopoIIA_CS.
IPR005737. TopoIV_B_Gneg.
[Graphical view]
Gene3DG3DSA:3.30.565.10. ATP_bd_ATPase. 1 hit.
G3DSA:3.30.230.10. Ribosomal_S5_D2-type_fold. 1 hit.
G3DSA:3.40.50.670. Topo_IIA_B/N_ab. 1 hit.
KOK02622.
PfamPF00204. DNA_gyraseB. 1 hit.
PF00986. DNA_gyraseB_C. 1 hit.
PF02518. HATPase_c. 1 hit.
[Graphical view]
PRINTSPR00418. TPI2FAMILY.
SMARTSM00387. HATPase_c. 1 hit.
SM00433. TOP2c. 1 hit.
[Graphical view]
SUPFAMSSF55874. ATP_bd_ATPase. 1 hit.
SSF54211. Ribosomal_S5_D2-typ_fold. 1 hit.
SSF56719. Topo_IIA_cen. 1 hit.
TIGRFAMsTIGR01055. ParE_Gneg. 1 hit.
PROSITEPS00177. TOPOISOMERASE_II. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ0BUC0_GRABC
AccessionPrimary (citable) accession number: Q0BUC0
Entry history
Integrated into UniProtKB/TrEMBL: October 17, 2006
Last sequence update: October 17, 2006
Last modified: January 25, 2012
This is version 41 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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