GbCGDNIH1_1744

Functionⁱ

GO - Molecular functionⁱ

allophanate hydrolase activity Source: UniProtKB-EC
carbon-nitrogen ligase activity, with glutamine as amido-N-donor Source: InterPro

Complete GO annotation...

Keywords - Molecular functionⁱ

HydrolaseImported

Enzyme and pathway databases

BioCycⁱ	GBET391165:GHON-1785-MONOMER.

BioCycⁱ

GBET391165:GHON-1785-MONOMER.

Names & Taxonomyⁱ

Protein namesⁱ	Submitted name: Allophanate hydrolaseImported Automatic assertion inferred from database entriesⁱ EMBL:ABI62642.1 (EC:3.5.1.54Imported Automatic assertion inferred from database entriesⁱ EMBL:ABI62642.1 )
Gene namesⁱ	Ordered Locus Names:GbCGDNIH1_1744Imported Automatic assertion inferred from database entriesⁱ EMBL:ABI62642.1
Organismⁱ	Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1)Imported Automatic assertion inferred from database entriesⁱ EMBL:ABI62642.1 Proteomes:UP000001963
Taxonomic identifierⁱ	391165 [NCBI]
Taxonomic lineageⁱ	cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Rhodospirillales › Acetobacteraceae › Granulibacter › Granulibacter bethesdensis
Proteomesⁱ	UP000001963: Chromosome

Interactionⁱ

Protein-protein interaction databases

STRINGⁱ	391165.GbCGDNIH1_1744.

STRINGⁱ

391165.GbCGDNIH1_1744.

Structureⁱ

3D structure databases

Select the link destinations:
PDBeⁱ
RCSB PDBⁱ
PDBjⁱ

Links Updated

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
4GYR	X-ray	2.80	A/B	1-592	[»]
4GYS	X-ray	2.20	A/B	1-592	[»]

ProteinModelPortalⁱ

Q0BRB0.

ModBaseⁱ

Search...

MobiDBⁱ

Search...

Family & Domainsⁱ

Phylogenomic databases

eggNOGⁱ	COG0154.
HOGENOMⁱ	HOG000116698.
KOⁱ	K01457.
OMAⁱ	MPLNHQL.
OrthoDBⁱ	EOG61P6R9.

Family and domain databases

Gene3Dⁱ	3.90.1300.10. 1 hit.
InterProⁱ	IPR014085. Allophanate_hydrolase. IPR000120. Amidase. IPR023631. Amidase_dom. [Graphical view]
PANTHERⁱ	PTHR11895. PTHR11895. 1 hit.
Pfamⁱ	PF01425. Amidase. 1 hit. [Graphical view]
SUPFAMⁱ	SSF75304. SSF75304. 1 hit.
TIGRFAMsⁱ	TIGR02713. allophanate_hyd. 1 hit.

Sequenceⁱ

Sequence statusⁱ: Complete.

Q0BRB0-1 [UniParc]FASTA Add to Basket

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        10         20         30         40         50
MTLSMTLEGI QAFLAQGGTI EQVVTEAYDR ITRYGDKAVW IALRPREEVL 
        60         70         80         90        100
AEARALDASP ATGKPLYGVP FAVKDNIDVA GLPCSAACPA FTYEPDRDAT 
       110        120        130        140        150
VVARLRAAGA IVLGKTNLDQ FATGLVGTRS PFGAPRCVFD QDYISGGSSS 
       160        170        180        190        200
GSAVAVAAGL VAFSLGTDTA GSGRVPAAFN NLVGVKPTKG LLSTSGVVPA 
       210        220        230        240        250
CRSLDCVTVF AASVAEGTLI RRIAEGYDAA DPYSRPSQKR RLPHVGLRVG 
       260        270        280        290        300
VPRQDQREFY GNTAYAALYQ RALDEMISLD AELVEIDFAP FRDAAKLLYG 
       310        320        330        340        350
GPWVAERLEA VGDHLSRAPD SFDPVVRSIV ETAKTLSAVD AFRGQYELAA 
       360        370        380        390        400
LTQQANAQWA RMDILLLPTA PTIHKVEAVM ADPVRLNSQL GHYTNFVNLL 
       410        420        430        440        450
DCAAIAVPAG FIETGLPFGV TLVGPAFSDD SMALIADRLH RRLEPGYGQD 
       460        470        480        490        500
RASLPDPVLE ETNPEQIALA VVGAHLSGQP LHWQLTERNA TLVARTRTAP 
       510        520        530        540        550
EYRLYALAET IPPKPGLVAD PDFTGDGIEI ELWSMDAEAF GTFTALVPAP 
       560        570        580        590 
LAIGTLRLAD GTSVKGFVCE PAGLVGAQDI TRFGGWRAYL AQ

Length:592

Mass (Da):63,014

Last modified:October 17, 2006 - v1

Checksum:ⁱ063BB2E111F91A59

GO

Sequence databases

Select the link destinations: EMBLⁱ GenBankⁱ DDBJⁱ Links Updated	CP000394 Genomic DNA. Translation: ABI62642.1.
RefSeqⁱ	YP_745565.1. NC_008343.1.

Genome annotation databases

EnsemblBacteriaⁱ	ABI62642; ABI62642; GbCGDNIH1_1744.
GeneIDⁱ	4275998.
KEGGⁱ	gbe:GbCGDNIH1_1744.
PATRICⁱ	22079691. VBIGraBet83793_1803.

Cross-referencesⁱ

Sequence databases

Select the link destinations: EMBLⁱ GenBankⁱ DDBJⁱ Links Updated	CP000394 Genomic DNA. Translation: ABI62642.1 .
RefSeqⁱ	YP_745565.1. NC_008343.1.

3D structure databases

Select the link destinations:
PDBeⁱ
RCSB PDBⁱ
PDBjⁱ

Links Updated

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
4GYR	X-ray	2.80	A/B	1-592	[» ]
4GYS	X-ray	2.20	A/B	1-592	[» ]

ProteinModelPortalⁱ

Q0BRB0.

ModBaseⁱ

Search...

MobiDBⁱ

Search...

Protein-protein interaction databases

STRINGⁱ	391165.GbCGDNIH1_1744.

STRINGⁱ

391165.GbCGDNIH1_1744.

Protocols and materials databases

Structural Biology Knowledgebase	Search...

Structural Biology Knowledgebase

Search...

Genome annotation databases

EnsemblBacteriaⁱ	ABI62642 ; ABI62642 ; GbCGDNIH1_1744 .
GeneIDⁱ	4275998.
KEGGⁱ	gbe:GbCGDNIH1_1744.
PATRICⁱ	22079691. VBIGraBet83793_1803.

Phylogenomic databases

eggNOGⁱ	COG0154.
HOGENOMⁱ	HOG000116698.
KOⁱ	K01457.
OMAⁱ	MPLNHQL.
OrthoDBⁱ	EOG61P6R9.

Enzyme and pathway databases

BioCycⁱ	GBET391165:GHON-1785-MONOMER.

BioCycⁱ

GBET391165:GHON-1785-MONOMER.

Family and domain databases

Gene3Dⁱ	3.90.1300.10. 1 hit.
InterProⁱ	IPR014085. Allophanate_hydrolase. IPR000120. Amidase. IPR023631. Amidase_dom. [Graphical view ]
PANTHERⁱ	PTHR11895. PTHR11895. 1 hit.
Pfamⁱ	PF01425. Amidase. 1 hit. [Graphical view ]
SUPFAMⁱ	SSF75304. SSF75304. 1 hit.
TIGRFAMsⁱ	TIGR02713. allophanate_hyd. 1 hit.
ProtoNetⁱ	Search...

Publicationsⁱ

« Hide 'large scale' publications

"Genome sequence analysis of the emerging human pathogenic acetic acid bacterium Granulibacter bethesdensis."
Greenberg D.E., Porcella S.F., Zelazny A.M., Virtaneva K., Sturdevant D.E., Kupko J.J. III, Barbian K.D., Babar A., Dorward D.W., Holland S.M.
J. Bacteriol. 189:8727-8736(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain:
ATCC BAA-1260 / CGDNIH1
Imported
Automatic assertion inferred from database entriesⁱ
- Proteomes:UP000001963
.
"The structure of allophanate hydrolase from Granulibacter bethesdensis provides insights into substrate specificity in the amidase signature family."
Lin Y., St Maurice M.
Biochemistry 52:690-700(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: X-RAY CRYSTALLOGRAPHY (2.20 ANGSTROMS).

Entry informationⁱ

Entry nameⁱ

Q0BRB0_GRABC

Accessionⁱ

Primary (citable) accession number: Q0BRB0

Entry historyⁱ

Integrated into UniProtKB/TrEMBL:	October 17, 2006
Last sequence update:	October 17, 2006
Last modified:	January 7, 2015
This is version 54 of the entry and version 1 of the sequence. [Complete history]

Entry statusⁱ

Unreviewed (UniProtKB/TrEMBL)

Miscellaneousⁱ

Keywords - Technical termⁱ

3D-structureCombined sources, Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsⁱ

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:

100%	UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%	UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%	UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

UniProtKB

Proteomes

UniRef

Supporting data

UniParc

Help

Q0BRB0

- Q0BRB0_GRABC

UniProt

Q0BRB0 - Q0BRB0_GRABC

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Allophanate hydrolase

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<p>Provides any useful information about the protein, mostly biological knowledge.</p><p><a href='../manual/function_section' target='_top'>More...</a></p>Functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:</p><p><a href='../manual/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

Enzyme and pathway databases

<p>Provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.</p><p><a href='../manual/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

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Protein-protein interaction databases

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3D structure databases

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Phylogenomic databases

Family and domain databases

<p>Displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including length and molecular weight.</p><p><a href='../manual/sequences_section' target='_top'>More...</a></p>Sequencei

Sequence databases

Genome annotation databases

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Sequence databases

3D structure databases

Protein-protein interaction databases

Protocols and materials databases

Genome annotation databases

Phylogenomic databases

Enzyme and pathway databases

Family and domain databases

<p>Contains the literature citations that are the sources of data used to annotate the entry. Each reference is numbered and contains several subsections allowing a precise description of a given citation.</p><p><a href='../manual/publications_section' target='_top'>More...</a></p>Publicationsi

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External Data

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Functionⁱ

GO - Molecular functionⁱ

Names & Taxonomyⁱ

Interactionⁱ

Structureⁱ

Family & Domainsⁱ

Sequenceⁱ

Cross-referencesⁱ

Publicationsⁱ

Entry informationⁱ

Miscellaneousⁱ