Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Allophanate hydrolase

Gene

GbCGDNIH1_1744

Organism
Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

HydrolaseImported

Enzyme and pathway databases

BioCyciGBET391165:GHON-1785-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Allophanate hydrolaseImported (EC:3.5.1.54Imported)
Gene namesi
Ordered Locus Names:GbCGDNIH1_1744Imported
OrganismiGranulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1)Imported
Taxonomic identifieri391165 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhodospirillalesAcetobacteraceaeGranulibacter
ProteomesiUP000001963 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi391165.GbCGDNIH1_1744.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4GYRX-ray2.80A/B1-592[»]
4GYSX-ray2.20A/B1-592[»]
ProteinModelPortaliQ0BRB0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0154.
HOGENOMiHOG000116698.
KOiK01457.
OMAiMPLNHQL.
OrthoDBiEOG61P6R9.

Family and domain databases

Gene3Di3.90.1300.10. 1 hit.
InterProiIPR014085. Allophanate_hydrolase.
IPR000120. Amidase.
IPR023631. Amidase_dom.
[Graphical view]
PANTHERiPTHR11895. PTHR11895. 1 hit.
PfamiPF01425. Amidase. 1 hit.
[Graphical view]
SUPFAMiSSF75304. SSF75304. 1 hit.
TIGRFAMsiTIGR02713. allophanate_hyd. 1 hit.

Sequencei

Sequence statusi: Complete.

Q0BRB0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTLSMTLEGI QAFLAQGGTI EQVVTEAYDR ITRYGDKAVW IALRPREEVL
60 70 80 90 100
AEARALDASP ATGKPLYGVP FAVKDNIDVA GLPCSAACPA FTYEPDRDAT
110 120 130 140 150
VVARLRAAGA IVLGKTNLDQ FATGLVGTRS PFGAPRCVFD QDYISGGSSS
160 170 180 190 200
GSAVAVAAGL VAFSLGTDTA GSGRVPAAFN NLVGVKPTKG LLSTSGVVPA
210 220 230 240 250
CRSLDCVTVF AASVAEGTLI RRIAEGYDAA DPYSRPSQKR RLPHVGLRVG
260 270 280 290 300
VPRQDQREFY GNTAYAALYQ RALDEMISLD AELVEIDFAP FRDAAKLLYG
310 320 330 340 350
GPWVAERLEA VGDHLSRAPD SFDPVVRSIV ETAKTLSAVD AFRGQYELAA
360 370 380 390 400
LTQQANAQWA RMDILLLPTA PTIHKVEAVM ADPVRLNSQL GHYTNFVNLL
410 420 430 440 450
DCAAIAVPAG FIETGLPFGV TLVGPAFSDD SMALIADRLH RRLEPGYGQD
460 470 480 490 500
RASLPDPVLE ETNPEQIALA VVGAHLSGQP LHWQLTERNA TLVARTRTAP
510 520 530 540 550
EYRLYALAET IPPKPGLVAD PDFTGDGIEI ELWSMDAEAF GTFTALVPAP
560 570 580 590
LAIGTLRLAD GTSVKGFVCE PAGLVGAQDI TRFGGWRAYL AQ
Length:592
Mass (Da):63,014
Last modified:October 17, 2006 - v1
Checksum:i063BB2E111F91A59
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000394 Genomic DNA. Translation: ABI62642.1.
RefSeqiWP_011632446.1. NC_008343.1.
YP_745565.1. NC_008343.1.

Genome annotation databases

EnsemblBacteriaiABI62642; ABI62642; GbCGDNIH1_1744.
KEGGigbe:GbCGDNIH1_1744.
PATRICi22079691. VBIGraBet83793_1803.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000394 Genomic DNA. Translation: ABI62642.1.
RefSeqiWP_011632446.1. NC_008343.1.
YP_745565.1. NC_008343.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4GYRX-ray2.80A/B1-592[»]
4GYSX-ray2.20A/B1-592[»]
ProteinModelPortaliQ0BRB0.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi391165.GbCGDNIH1_1744.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABI62642; ABI62642; GbCGDNIH1_1744.
KEGGigbe:GbCGDNIH1_1744.
PATRICi22079691. VBIGraBet83793_1803.

Phylogenomic databases

eggNOGiCOG0154.
HOGENOMiHOG000116698.
KOiK01457.
OMAiMPLNHQL.
OrthoDBiEOG61P6R9.

Enzyme and pathway databases

BioCyciGBET391165:GHON-1785-MONOMER.

Family and domain databases

Gene3Di3.90.1300.10. 1 hit.
InterProiIPR014085. Allophanate_hydrolase.
IPR000120. Amidase.
IPR023631. Amidase_dom.
[Graphical view]
PANTHERiPTHR11895. PTHR11895. 1 hit.
PfamiPF01425. Amidase. 1 hit.
[Graphical view]
SUPFAMiSSF75304. SSF75304. 1 hit.
TIGRFAMsiTIGR02713. allophanate_hyd. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Genome sequence analysis of the emerging human pathogenic acetic acid bacterium Granulibacter bethesdensis."
    Greenberg D.E., Porcella S.F., Zelazny A.M., Virtaneva K., Sturdevant D.E., Kupko J.J. III, Barbian K.D., Babar A., Dorward D.W., Holland S.M.
    J. Bacteriol. 189:8727-8736(2007) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC BAA-1260 / CGDNIH1Imported.
  2. "The structure of allophanate hydrolase from Granulibacter bethesdensis provides insights into substrate specificity in the amidase signature family."
    Lin Y., St Maurice M.
    Biochemistry 52:690-700(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (2.20 ANGSTROMS).

Entry informationi

Entry nameiQ0BRB0_GRABC
AccessioniPrimary (citable) accession number: Q0BRB0
Entry historyi
Integrated into UniProtKB/TrEMBL: October 17, 2006
Last sequence update: October 17, 2006
Last modified: June 24, 2015
This is version 60 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.