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Protein
Submitted name:

16S rRNA m(5)C 967 methyltransferase

Gene

GbCGDNIH1_1754

Organism
Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

MethyltransferaseSAAS annotationImported, Transferase

Keywords - Ligandi

RNA-bindingSAAS annotation, S-adenosyl-L-methionineSAAS annotation

Enzyme and pathway databases

BioCyciGBET391165:GHON-1795-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
16S rRNA m(5)C 967 methyltransferaseImported (EC:2.1.1.-Imported)
Gene namesi
Ordered Locus Names:GbCGDNIH1_1754Imported
OrganismiGranulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1)Imported
Taxonomic identifieri391165 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhodospirillalesAcetobacteraceaeGranulibacter
Proteomesi
  • UP000001963 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi391165.GbCGDNIH1_1754.

Structurei

3D structure databases

ProteinModelPortaliQ0BRA0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini159 – 452SAM_MT_RSMB_NOPInterPro annotationAdd BLAST294

Sequence similaritiesi

Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.SAAS annotation

Phylogenomic databases

eggNOGiENOG4105CYJ. Bacteria.
COG0144. LUCA.
HOGENOMiHOG000037302.
KOiK03500.
OMAiVFCTCSL.
OrthoDBiPOG091H02E2.

Family and domain databases

Gene3Di1.10.940.10. 1 hit.
3.40.50.150. 1 hit.
InterProiIPR001678. MeTrfase_RsmB/NOP2.
IPR006027. NusB_RsmB_TIM44.
IPR023267. RCMT.
IPR029063. SAM-dependent_MTases.
[Graphical view]
PfamiPF01189. Methyltr_RsmB-F. 1 hit.
PF01029. NusB. 1 hit.
[Graphical view]
PRINTSiPR02008. RCMTFAMILY.
SUPFAMiSSF48013. SSF48013. 1 hit.
SSF53335. SSF53335. 1 hit.
PROSITEiPS51686. SAM_MT_RSMB_NOP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q0BRA0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLAGKGRAAQ KAMMTIRSPS SSRRPSAPPV AMDPTRDAAC RLLNAVLEQH
60 70 80 90 100
RSLEEALNAL PPMEPRDRAA AHRLAAATLR RLGTIDAVLE PFLRREPPAP
110 120 130 140 150
VRDILRLGAA GLLFLDTPPH AAVGTAVDLA RQLRLAPFTG LINAVLRKVA
160 170 180 190 200
TGGQEMLNGL DSPRLDTPGW LWTAWGRDAR AIALAHQTEA PLDLTLRPGI
210 220 230 240 250
TPPAEGILLP NGTIRLPPGT RVSILPGFEE GAFWVQDAAA SLPARLLAAR
260 270 280 290 300
EGEKIVDLCA APGGKTAQLA MSGAEVIAVE REAVRVPRLR ENLARLRLDV
310 320 330 340 350
QVAVADAAEW TPPAGFVPDA ILLDAPCSAT GTIRRHPDVP HLKRQRDITA
360 370 380 390 400
LTAQQDRLLA AALAMLRPGG RLIYAVCSMQ PEEGRQRIEH ALKTLPSVTL
410 420 430 440 450
SPFTVEELAF LPGARTAEGY LRTHPGLAFA GPEGSPPITG MDGFFAARLT

VR
Length:452
Mass (Da):48,327
Last modified:October 17, 2006 - v1
Checksum:i1B37BA59244B3F86
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000394 Genomic DNA. Translation: ABI62652.1.

Genome annotation databases

EnsemblBacteriaiABI62652; ABI62652; GbCGDNIH1_1754.
KEGGigbe:GbCGDNIH1_1754.
PATRICi22079711. VBIGraBet83793_1813.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000394 Genomic DNA. Translation: ABI62652.1.

3D structure databases

ProteinModelPortaliQ0BRA0.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi391165.GbCGDNIH1_1754.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABI62652; ABI62652; GbCGDNIH1_1754.
KEGGigbe:GbCGDNIH1_1754.
PATRICi22079711. VBIGraBet83793_1813.

Phylogenomic databases

eggNOGiENOG4105CYJ. Bacteria.
COG0144. LUCA.
HOGENOMiHOG000037302.
KOiK03500.
OMAiVFCTCSL.
OrthoDBiPOG091H02E2.

Enzyme and pathway databases

BioCyciGBET391165:GHON-1795-MONOMER.

Family and domain databases

Gene3Di1.10.940.10. 1 hit.
3.40.50.150. 1 hit.
InterProiIPR001678. MeTrfase_RsmB/NOP2.
IPR006027. NusB_RsmB_TIM44.
IPR023267. RCMT.
IPR029063. SAM-dependent_MTases.
[Graphical view]
PfamiPF01189. Methyltr_RsmB-F. 1 hit.
PF01029. NusB. 1 hit.
[Graphical view]
PRINTSiPR02008. RCMTFAMILY.
SUPFAMiSSF48013. SSF48013. 1 hit.
SSF53335. SSF53335. 1 hit.
PROSITEiPS51686. SAM_MT_RSMB_NOP. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ0BRA0_GRABC
AccessioniPrimary (citable) accession number: Q0BRA0
Entry historyi
Integrated into UniProtKB/TrEMBL: October 17, 2006
Last sequence update: October 17, 2006
Last modified: November 30, 2016
This is version 62 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.