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Protein
Submitted name:

16S rRNA m(5)C 967 methyltransferase

Gene

GbCGDNIH1_1754

Organism
Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Binding sitei280S-adenosyl-L-methioninePROSITE-ProRule annotation1
Binding sitei306S-adenosyl-L-methioninePROSITE-ProRule annotation1
Binding sitei324S-adenosyl-L-methioninePROSITE-ProRule annotation1
Active sitei377NucleophilePROSITE-ProRule annotation1

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionMethyltransferasePROSITE-ProRule annotationSAAS annotationImported, RNA-bindingPROSITE-ProRule annotationSAAS annotation, Transferase
LigandS-adenosyl-L-methioninePROSITE-ProRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
16S rRNA m(5)C 967 methyltransferaseImported (EC:2.1.1.176Imported)
Gene namesi
Ordered Locus Names:GbCGDNIH1_1754Imported
OrganismiGranulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1)Imported
Taxonomic identifieri391165 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhodospirillalesAcetobacteraceaeGranulibacter
Proteomesi
  • UP000001963 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi391165.GbCGDNIH1_1754

Structurei

3D structure databases

ProteinModelPortaliQ0BRA0
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini159 – 452SAM_MT_RSMB_NOPInterPro annotationAdd BLAST294

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Regioni259 – 265S-adenosyl-L-methionine bindingPROSITE-ProRule annotation7

Sequence similaritiesi

Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.PROSITE-ProRule annotationSAAS annotation

Phylogenomic databases

eggNOGiENOG4105CYJ Bacteria
COG0144 LUCA
HOGENOMiHOG000037302
KOiK03500
OMAiLRVNRQH
OrthoDBiPOG091H02E2

Family and domain databases

Gene3Di1.10.940.10, 1 hit
InterProiView protein in InterPro
IPR001678 MeTrfase_RsmB/NOP2
IPR035926 NusB-like_sf
IPR006027 NusB_RsmB_TIM44
IPR023267 RCMT
IPR029063 SAM-dependent_MTases
PfamiView protein in Pfam
PF01189 Methyltr_RsmB-F, 1 hit
PF01029 NusB, 1 hit
PRINTSiPR02008 RCMTFAMILY
SUPFAMiSSF48013 SSF48013, 1 hit
SSF53335 SSF53335, 1 hit
PROSITEiView protein in PROSITE
PS51686 SAM_MT_RSMB_NOP, 1 hit

Sequencei

Sequence statusi: Complete.

Q0BRA0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLAGKGRAAQ KAMMTIRSPS SSRRPSAPPV AMDPTRDAAC RLLNAVLEQH
60 70 80 90 100
RSLEEALNAL PPMEPRDRAA AHRLAAATLR RLGTIDAVLE PFLRREPPAP
110 120 130 140 150
VRDILRLGAA GLLFLDTPPH AAVGTAVDLA RQLRLAPFTG LINAVLRKVA
160 170 180 190 200
TGGQEMLNGL DSPRLDTPGW LWTAWGRDAR AIALAHQTEA PLDLTLRPGI
210 220 230 240 250
TPPAEGILLP NGTIRLPPGT RVSILPGFEE GAFWVQDAAA SLPARLLAAR
260 270 280 290 300
EGEKIVDLCA APGGKTAQLA MSGAEVIAVE REAVRVPRLR ENLARLRLDV
310 320 330 340 350
QVAVADAAEW TPPAGFVPDA ILLDAPCSAT GTIRRHPDVP HLKRQRDITA
360 370 380 390 400
LTAQQDRLLA AALAMLRPGG RLIYAVCSMQ PEEGRQRIEH ALKTLPSVTL
410 420 430 440 450
SPFTVEELAF LPGARTAEGY LRTHPGLAFA GPEGSPPITG MDGFFAARLT

VR
Length:452
Mass (Da):48,327
Last modified:October 17, 2006 - v1
Checksum:i1B37BA59244B3F86
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000394 Genomic DNA Translation: ABI62652.1

Genome annotation databases

EnsemblBacteriaiABI62652; ABI62652; GbCGDNIH1_1754
KEGGigbe:GbCGDNIH1_1754

Similar proteinsi

Entry informationi

Entry nameiQ0BRA0_GRABC
AccessioniPrimary (citable) accession number: Q0BRA0
Entry historyiIntegrated into UniProtKB/TrEMBL: October 17, 2006
Last sequence update: October 17, 2006
Last modified: May 23, 2018
This is version 69 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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