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Protein

Glycogen synthase

Gene

glgA

Organism
Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Synthesizes alpha-1,4-glucan chains using ADP-glucose.UniRule annotation

Catalytic activityi

ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1).UniRule annotation

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei15 – 151ADP-glucoseUniRule annotation

GO - Molecular functioni

  1. starch synthase activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. glycogen biosynthetic process Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Keywords - Biological processi

Glycogen biosynthesis

Enzyme and pathway databases

BioCyciGBET391165:GHON-2391-MONOMER.
UniPathwayiUPA00164.

Protein family/group databases

CAZyiGT5. Glycosyltransferase Family 5.

Names & Taxonomyi

Protein namesi
Recommended name:
Glycogen synthaseUniRule annotation (EC:2.4.1.21UniRule annotation)
Alternative name(s):
Starch [bacterial glycogen] synthaseUniRule annotation
Gene namesi
Name:glgAUniRule annotation
Ordered Locus Names:GbCGDNIH1_2341
OrganismiGranulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1)
Taxonomic identifieri391165 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhodospirillalesAcetobacteraceaeGranulibacter
ProteomesiUP000001963: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 480480Glycogen synthasePRO_1000014361Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi391165.GbCGDNIH1_2341.

Structurei

3D structure databases

ProteinModelPortaliQ0BPL3.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.UniRule annotation

Phylogenomic databases

eggNOGiCOG0297.
HOGENOMiHOG000294941.
KOiK00703.
OMAiPFWRPDI.
OrthoDBiEOG6JTC6Z.

Family and domain databases

HAMAPiMF_00484. Glycogen_synth.
InterProiIPR001296. Glyco_trans_1.
IPR011835. Glycogen/starch_synth.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamiPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02095. glgA. 1 hit.

Sequencei

Sequence statusi: Complete.

Q0BPL3-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MRVLNVASEA YPWIKTGGLA DVAGALPAAL AEHDVDMRTL LPAYAGLRQR
60 70 80 90 100
PETRPVHHYA DLFGGAASIL EARLTGGLTL YLLDAPHLYD RPGGPYTDAN
110 120 130 140 150
GRDWADNAER FAAFCRAAAD IALGILPDWT PDIVHAHDWQ AGLVPAYLAL
160 170 180 190 200
SEASPRPPVL FTIHNLAFQG VVPRDRLAAL LLPPDSFSVD GVEYYGQIGL
210 220 230 240 250
LKAGLHYADA LTTVSPSYAR EIQTDTGGMG LGGLLRDRAA VLNGLLNGID
260 270 280 290 300
MTEWNPAHDP HVKAHFDRHS LEHRTINREA LRTRFGLDSS AGPLFGIVSR
310 320 330 340 350
LTGQKGIDLV LNALPFLISQ QAQLVVLGSG DKGLEQGLLQ AAQTHPRQIA
360 370 380 390 400
VFSGYDEALS RQIFSGADAM LIPSRFEPCG LTQLYAMRYG AVPIVSRVGG
410 420 430 440 450
LADTIIDANT AACEAGVATG LMFQPDGEDS LIEPLSRAIR LFHQAEIWER
460 470 480
LQHRGMETDS SWTLRSTAYV ALYTRLLSLR
Length:480
Mass (Da):52,021
Last modified:October 17, 2006 - v1
Checksum:i87FF3F3A763A72D3
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000394 Genomic DNA. Translation: ABI63239.1.
RefSeqiYP_746162.1. NC_008343.1.

Genome annotation databases

EnsemblBacteriaiABI63239; ABI63239; GbCGDNIH1_2341.
GeneIDi4276317.
KEGGigbe:GbCGDNIH1_2341.
PATRICi22080957. VBIGraBet83793_2427.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000394 Genomic DNA. Translation: ABI63239.1.
RefSeqiYP_746162.1. NC_008343.1.

3D structure databases

ProteinModelPortaliQ0BPL3.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi391165.GbCGDNIH1_2341.

Protein family/group databases

CAZyiGT5. Glycosyltransferase Family 5.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABI63239; ABI63239; GbCGDNIH1_2341.
GeneIDi4276317.
KEGGigbe:GbCGDNIH1_2341.
PATRICi22080957. VBIGraBet83793_2427.

Phylogenomic databases

eggNOGiCOG0297.
HOGENOMiHOG000294941.
KOiK00703.
OMAiPFWRPDI.
OrthoDBiEOG6JTC6Z.

Enzyme and pathway databases

UniPathwayiUPA00164.
BioCyciGBET391165:GHON-2391-MONOMER.

Family and domain databases

HAMAPiMF_00484. Glycogen_synth.
InterProiIPR001296. Glyco_trans_1.
IPR011835. Glycogen/starch_synth.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamiPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02095. glgA. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Genome sequence analysis of the emerging human pathogenic acetic acid bacterium Granulibacter bethesdensis."
    Greenberg D.E., Porcella S.F., Zelazny A.M., Virtaneva K., Sturdevant D.E., Kupko J.J. III, Barbian K.D., Babar A., Dorward D.W., Holland S.M.
    J. Bacteriol. 189:8727-8736(2007) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC BAA-1260 / CGDNIH1.

Entry informationi

Entry nameiGLGA_GRABC
AccessioniPrimary (citable) accession number: Q0BPL3
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: October 17, 2006
Last modified: January 7, 2015
This is version 57 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.