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Protein

Flagellar protein

Gene

Bamb_0030

Organism
Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) (Burkholderia cepacia (strain AMMD))
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Recommended name:
Flagellar proteinUniRule annotation
Gene namesi
Ordered Locus Names:Bamb_0030Imported
OrganismiBurkholderia ambifaria (strain ATCC BAA-244 / AMMD) (Burkholderia cepacia (strain AMMD))Imported
Taxonomic identifieri339670 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderiaBurkholderia cepacia complex
Proteomesi
  • UP000000662 Componenti: Chromosome 1

Subcellular locationi

  • Cell membrane UniRule annotation
  • Bacterial flagellum basal body UniRule annotation

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei57 – 84HelicalUniRule annotationAdd BLAST28

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Bacterial flagellumUniRule annotation, Cell membraneUniRule annotation, Cell projection, Cilium, FlagellumImported, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 33Sequence analysisAdd BLAST33
ChainiPRO_500416946534 – 188Flagellar proteinSequence analysisAdd BLAST155

Interactioni

Protein-protein interaction databases

STRINGi339670.Bamb_0030.

Family & Domainsi

Sequence similaritiesi

Belongs to the FliO/MopB family.UniRule annotation

Keywords - Domaini

SignalSequence analysis, Transmembrane, Transmembrane helixUniRule annotation

Phylogenomic databases

eggNOGiENOG4105XRX. Bacteria.
ENOG41125F7. LUCA.
HOGENOMiHOG000253556.
KOiK02418.
OMAiMNAVNNA.
OrthoDBiPOG091H047I.

Family and domain databases

InterProiIPR022781. Flagellar_biosynth_FliO.
[Graphical view]
PfamiPF04347. FliO. 1 hit.
[Graphical view]
TIGRFAMsiTIGR03500. FliO_TIGR. 1 hit.

Sequencei

Sequence statusi: Complete.

Q0BJT2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNVVAPGRRV RVATSVAAAV AIAASLACVP AGAADMNAVN NAGSIASSVM
60 70 80 90 100
VGSAVPSLGV GAVLQTLVGL AVVIGLVFGC AWLARRFGFQ PARRGGPLKV
110 120 130 140 150
VSSVGLGAKE SATIVEIGDT WLVLGVAPGN VRLLHTLPAG SAVAPAPADL
160 170 180
PAGTRSADRG QPGTFGARFR DALAGEAAKR FGRGKDTR
Length:188
Mass (Da):18,661
Last modified:October 17, 2006 - v1
Checksum:i330BBF1E72032D62
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000440 Genomic DNA. Translation: ABI85591.1.
RefSeqiWP_011655569.1. NZ_CP009798.1.

Genome annotation databases

EnsemblBacteriaiABI85591; ABI85591; Bamb_0030.
KEGGibam:Bamb_0030.
PATRICi19015498. VBIBurAmb61564_0077.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000440 Genomic DNA. Translation: ABI85591.1.
RefSeqiWP_011655569.1. NZ_CP009798.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi339670.Bamb_0030.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABI85591; ABI85591; Bamb_0030.
KEGGibam:Bamb_0030.
PATRICi19015498. VBIBurAmb61564_0077.

Phylogenomic databases

eggNOGiENOG4105XRX. Bacteria.
ENOG41125F7. LUCA.
HOGENOMiHOG000253556.
KOiK02418.
OMAiMNAVNNA.
OrthoDBiPOG091H047I.

Family and domain databases

InterProiIPR022781. Flagellar_biosynth_FliO.
[Graphical view]
PfamiPF04347. FliO. 1 hit.
[Graphical view]
TIGRFAMsiTIGR03500. FliO_TIGR. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiQ0BJT2_BURCM
AccessioniPrimary (citable) accession number: Q0BJT2
Entry historyi
Integrated into UniProtKB/TrEMBL: October 17, 2006
Last sequence update: October 17, 2006
Last modified: November 30, 2016
This is version 63 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.