Q0BJG4 (Q0BJG4_BURCM) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
TPR repeat-containing protein EMBL ABI85709.1

Gene names

Ordered Locus Names:

Bamb_0148

Organism

Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) (Burkholderia cepacia (strain AMMD)) [Complete proteome] [HAMAP]

Taxonomic identifier

339670 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Burkholderiaceae › Burkholderia › Burkholderia cepacia complex

Protein attributes

Sequence length	619 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Domain	Repeat RuleBase RU003537 TPR repeat RuleBase RU003339
Technical term	Complete proteome
Gene Ontology (GO)
Molecular function	binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q0BJG4 [UniParc]. Last modified October 17, 2006. Version 1. Checksum: E460C3EC9F704002	FASTA	619	68,547
	10 20 30 40 50 60 MCDAGLRAVA RSVPNSRWLT TMTDLTLSDS PVATIEAALA HHQADRLEEA ETLYRRILDA 70 80 90 100 110 120 EPRHADALHL LGLIGHQYGR YHEATELIMA AIEIKPDATY YYNLGNVMQA NNRPAAAAEC 130 140 150 160 170 180 FRLAIELRPG YVDAYNNLGN AQRLAGHARE AVDAFCQAIA LQPDHGQAYN NLGNALLDLN 190 200 210 220 230 240 EIPAALEAYQ HAVALRPELP EPRSNLLFAY HYSDAFDPHA YLDEAARFDA LVTQRAQPYS 250 260 270 280 290 300 TWQVDLGARI GRPLRVGIVS GDLKAHPVGY FIEGMLAHVK RERIELHAYP TREIEDDVTA 310 320 330 340 350 360 RIKPRFASWT CIAGLDDAAA AARIHDDGID VLIDASGHTI HNRLPLFAWK PAPLQVSWPG 370 380 390 400 410 420 YFASTGMRAI DYVLGDRHVM PADEAAHFVE RAWHLPDSYL CFTPPAVELD GGPLPMLANG 430 440 450 460 470 480 YPTFGYFGKL AKLTDHVIDV WSRVLRDVPN ARLFVKAPHL DDPREQDALA ARFAAHGIDA 490 500 510 520 530 540 ARLLFEGRSP RDEYLAAYRR VDLMLSPFPY PGGTTTAEAL WMGVPVLGRR GARFLSHICE 550 560 570 580 590 600 SLLQAARLPE WIADDDDAYV AKAVAFARNP AELAVLRTTL RAQVLASPLC DAPRFARHFE 610 EALHEMWVRR VDAAPGAAA

References

[1]

"Complete sequence of chromosome 1 of Burkholderia cepacia AMMD." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Pitluck S., Bruce D., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L. , Kyrpides N., Kim E., Parke J., Coenye T., Konstantinidis K., Ramette A., Tiedje J., Richardson P. Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000440 Genomic DNA. Translation: ABI85709.1.
RefSeq	YP_772043.1. NC_008390.1.
3D structure databases
ProteinModelPortal	Q0BJG4.
ModBase	Search...
Protein-protein interaction databases
STRING	Q0BJG4.
Protein family/group databases
CAZy	GT41. Glycosyltransferase Family 41.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4310890.
GenomeReviews	Gene locus Bamb_0148 in contig CP000440_GR.
KEGG	bam:Bamb_0148.
NMPDR	fig|339670.3.peg.3614.
PATRIC	19015746. VBIBurAmb61564_0200.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG3914.
HOGENOM	HBG684498.
OMA	FCQAIAL.
ProtClustDB	CLSK770198.
Family and domain databases
InterPro	IPR001440. TPR-1. IPR013026. TPR-contain. IPR011990. TPR-like_helical. IPR013105. TPR_2. IPR019734. TPR_repeat. [Graphical view]
Gene3D	G3DSA:1.25.40.10. TPR-like_helical. 1 hit.
Pfam	PF00515. TPR_1. 1 hit. PF07719. TPR_2. 1 hit. [Graphical view]
SMART	SM00028. TPR. 5 hits. [Graphical view]
PROSITE	PS50005. TPR. 5 hits. PS50293. TPR_REGION. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q0BJG4_BURCM

Accession

Primary (citable) accession number: Q0BJG4

Entry history

Integrated into UniProtKB/TrEMBL:	October 17, 2006
Last sequence update:	October 17, 2006
Last modified:	December 14, 2011
This is version 33 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)