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Protein
Submitted name:

Methyl-accepting chemotaxis sensory transducer

Gene

Bamb_0171

Organism
Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) (Burkholderia cepacia (strain AMMD))
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

BioCyciBAMB339670:GH48-174-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Methyl-accepting chemotaxis sensory transducerImported
Gene namesi
Ordered Locus Names:Bamb_0171Imported
OrganismiBurkholderia ambifaria (strain ATCC BAA-244 / AMMD) (Burkholderia cepacia (strain AMMD))Imported
Taxonomic identifieri339670 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderiaBurkholderia cepacia complex
ProteomesiUP000000662 Componenti: Chromosome 1

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2525 PotentialImportedAdd
BLAST
Chaini26 – 648623 PotentialImportedPRO_5000127175Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi339670.Bamb_0171.

Structurei

3D structure databases

ProteinModelPortaliQ0BJE1.
SMRiQ0BJE1. Positions 293-516.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

SignalImported

Phylogenomic databases

eggNOGiCOG0840.
HOGENOMiHOG000148074.
KOiK03406.
OMAiMAAYHAV.
OrthoDBiEOG6B62H8.

Family and domain databases

InterProiIPR004090. Chemotax_Me-accpt_rcpt.
IPR003122. Chemotax_Me-accpt_rcpt_lig-bd.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamiPF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
PF02203. TarH. 1 hit.
[Graphical view]
PRINTSiPR00260. CHEMTRNSDUCR.
SMARTiSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
SUPFAMiSSF47170. SSF47170. 1 hit.
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q0BJE1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLHNWSIRTT LTAVGLILVG LAAAVGGLGL YALDHASRSL DEIAHVDLPA
60 70 80 90 100
IHTLDDTSSY LLRARVSLDR FRSLTEAGNT ADASKVLERA QELYTKSNQN
110 120 130 140 150
WQAFQATPKF GIEQALVDDL AARYATIVKE GVEPEFAAAR AGDMAAYHAV
160 170 180 190 200
ADTKISPMFV AYDQAAAAVV AALQKRAEDR QAATQSRISM MIGLIAAGVA
210 220 230 240 250
IAFVVVIAIR FAMRGLIINP LEDAIAHFER IAGGDLTQPV NVSSTNEIGR
260 270 280 290 300
LFGGIKRMQD AVTTMVQAVH RGTESIDVGA REISTGNTDL SQRTEEQAAS
310 320 330 340 350
LQETASSMEQ LTGTVRQNAE NARQASQLAV NASDIATHGG EVVGQVVSTM
360 370 380 390 400
QDIAASSGKV VDIIGTIEGI AFQTNILALN AAVEAARAGE QGRGFAVVAG
410 420 430 440 450
EVRSLAQRSA SAAKEIKQLI GDSAERVESG SALVARAGST MDEIVQAVRR
460 470 480 490 500
VTDIMGEISA ASDEQSTGIE QVNRAVGQMD SVTQQNAALV EEAAAAAASL
510 520 530 540 550
EEQTRQMKAI VSSWRVTGGI AMAPVRGAAR PAAQTQAPAS PSESRHEAAP
560 570 580 590 600
VAHAPQAAQP AAQPARRAAP APHAAAPATR NAAKPATDSA ARASKDAPAA
610 620 630 640
GGYGPRLAKG AAASPKPADK PALVRPALNG EKPALAAAGA SDDDWETF
Length:648
Mass (Da):67,266
Last modified:October 17, 2006 - v1
Checksum:i3D97F5DA0DBA4F99
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000440 Genomic DNA. Translation: ABI85732.1.
RefSeqiWP_011655684.1. NZ_CP009798.1.

Genome annotation databases

EnsemblBacteriaiABI85732; ABI85732; Bamb_0171.
KEGGibam:Bamb_0171.
PATRICi19015792. VBIBurAmb61564_0223.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000440 Genomic DNA. Translation: ABI85732.1.
RefSeqiWP_011655684.1. NZ_CP009798.1.

3D structure databases

ProteinModelPortaliQ0BJE1.
SMRiQ0BJE1. Positions 293-516.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi339670.Bamb_0171.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABI85732; ABI85732; Bamb_0171.
KEGGibam:Bamb_0171.
PATRICi19015792. VBIBurAmb61564_0223.

Phylogenomic databases

eggNOGiCOG0840.
HOGENOMiHOG000148074.
KOiK03406.
OMAiMAAYHAV.
OrthoDBiEOG6B62H8.

Enzyme and pathway databases

BioCyciBAMB339670:GH48-174-MONOMER.

Family and domain databases

InterProiIPR004090. Chemotax_Me-accpt_rcpt.
IPR003122. Chemotax_Me-accpt_rcpt_lig-bd.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamiPF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
PF02203. TarH. 1 hit.
[Graphical view]
PRINTSiPR00260. CHEMTRNSDUCR.
SMARTiSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
SUPFAMiSSF47170. SSF47170. 1 hit.
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of chromosome 1 of Burkholderia cepacia AMMD."
    Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Pitluck S., Bruce D., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L.
    , Kyrpides N., Kim E., Parke J., Coenye T., Konstantinidis K., Ramette A., Tiedje J., Richardson P.
    Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC BAA-244 / AMMDImported.

Entry informationi

Entry nameiQ0BJE1_BURCM
AccessioniPrimary (citable) accession number: Q0BJE1
Entry historyi
Integrated into UniProtKB/TrEMBL: October 17, 2006
Last sequence update: October 17, 2006
Last modified: July 22, 2015
This is version 55 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.