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Q0BJE1 (Q0BJE1_BURCM) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 45. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length648 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Ontologies

Keywords
   DomainSignal EMBL ABI85732.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processchemotaxis

Inferred from electronic annotation. Source: InterPro

   Cellular_componentintegral component of membrane

Inferred from electronic annotation. Source: InterPro

   Molecular_functiontransmembrane signaling receptor activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2525 Potential EMBL ABI85732.1
Chain26 – 648623 Potential EMBL ABI85732.1
PRO_5000127175

Sequences

Sequence LengthMass (Da)Tools
Q0BJE1 [UniParc].

Last modified October 17, 2006. Version 1.
Checksum: 3D97F5DA0DBA4F99

FASTA64867,266
        10         20         30         40         50         60 
MLHNWSIRTT LTAVGLILVG LAAAVGGLGL YALDHASRSL DEIAHVDLPA IHTLDDTSSY 

        70         80         90        100        110        120 
LLRARVSLDR FRSLTEAGNT ADASKVLERA QELYTKSNQN WQAFQATPKF GIEQALVDDL 

       130        140        150        160        170        180 
AARYATIVKE GVEPEFAAAR AGDMAAYHAV ADTKISPMFV AYDQAAAAVV AALQKRAEDR 

       190        200        210        220        230        240 
QAATQSRISM MIGLIAAGVA IAFVVVIAIR FAMRGLIINP LEDAIAHFER IAGGDLTQPV 

       250        260        270        280        290        300 
NVSSTNEIGR LFGGIKRMQD AVTTMVQAVH RGTESIDVGA REISTGNTDL SQRTEEQAAS 

       310        320        330        340        350        360 
LQETASSMEQ LTGTVRQNAE NARQASQLAV NASDIATHGG EVVGQVVSTM QDIAASSGKV 

       370        380        390        400        410        420 
VDIIGTIEGI AFQTNILALN AAVEAARAGE QGRGFAVVAG EVRSLAQRSA SAAKEIKQLI 

       430        440        450        460        470        480 
GDSAERVESG SALVARAGST MDEIVQAVRR VTDIMGEISA ASDEQSTGIE QVNRAVGQMD 

       490        500        510        520        530        540 
SVTQQNAALV EEAAAAAASL EEQTRQMKAI VSSWRVTGGI AMAPVRGAAR PAAQTQAPAS 

       550        560        570        580        590        600 
PSESRHEAAP VAHAPQAAQP AAQPARRAAP APHAAAPATR NAAKPATDSA ARASKDAPAA 

       610        620        630        640 
GGYGPRLAKG AAASPKPADK PALVRPALNG EKPALAAAGA SDDDWETF 

« Hide

References

[1]"Complete sequence of chromosome 1 of Burkholderia cepacia AMMD."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Pitluck S., Bruce D., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L. expand/collapse author list , Kyrpides N., Kim E., Parke J., Coenye T., Konstantinidis K., Ramette A., Tiedje J., Richardson P.
Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC BAA-244 / AMMD.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000440 Genomic DNA. Translation: ABI85732.1.
RefSeqYP_772066.1. NC_008390.1.

3D structure databases

ProteinModelPortalQ0BJE1.
SMRQ0BJE1. Positions 293-516.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING339670.Bamb_0171.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABI85732; ABI85732; Bamb_0171.
GeneID4308575.
KEGGbam:Bamb_0171.
PATRIC19015792. VBIBurAmb61564_0223.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0840.
HOGENOMHOG000148074.
KOK03406.
OMAAYHAVAD.
OrthoDBEOG6B62H8.
ProtClustDBCLSK931214.

Enzyme and pathway databases

BioCycBAMB339670:GH48-174-MONOMER.

Family and domain databases

InterProIPR004090. Chemotax_Me-accpt_rcpt.
IPR003122. Chemotax_Me-accpt_rcpt_lig-bd.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamPF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
PF02203. TarH. 1 hit.
[Graphical view]
PRINTSPR00260. CHEMTRNSDUCR.
SMARTSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
SUPFAMSSF47170. SSF47170. 1 hit.
PROSITEPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ0BJE1_BURCM
AccessionPrimary (citable) accession number: Q0BJE1
Entry history
Integrated into UniProtKB/TrEMBL: October 17, 2006
Last sequence update: October 17, 2006
Last modified: February 19, 2014
This is version 45 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)