Q0BIW5 (HIS4_BURCM) Reviewed, UniProtKB/Swiss-Prot
Last modified
January 25, 2012.
Version 35.
History...
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase EC=5.3.1.16 Alternative name(s): Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase | ||||
| Gene names |
| ||||
| Organism | Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) (Burkholderia cepacia (strain AMMD)) [Complete proteome] [HAMAP] | ||||
| Taxonomic identifier | 339670 [NCBI] | ||||
| Taxonomic lineage | Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Burkholderiaceae › Burkholderia › Burkholderia cepacia complex |
Protein attributes
| Sequence length | 251 AA. |
| Sequence status | Complete. |
| Protein existence | Inferred from homology |
General annotation (Comments)
| Catalytic activity | 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide = 5-((5-phospho-1-deoxyribulos-1-ylamino)methylideneamino)-1-(5-phosphoribosyl)imidazole-4-carboxamide. HAMAP MF_01014 |
| Pathway | Amino-acid biosynthesis; L-histidine biosynthesis; L-histidine from 5-phospho-alpha-D-ribose 1-diphosphate: step 4/9. HAMAP MF_01014 |
| Subcellular location | Cytoplasm By similarity HAMAP MF_01014. |
| Sequence similarities | Belongs to the HisA/HisF family. |
Ontologies
| Keywords | |
|---|---|
| Biological process | Amino-acid biosynthesis Histidine biosynthesis |
| Cellular component | Cytoplasm |
| Molecular function | Isomerase |
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| Biological process | histidine biosynthetic process Inferred from electronic annotation. Source: UniProtKB-KW |
| Cellular component | cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell |
| Molecular function | 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity Inferred from electronic annotation. Source: EC |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 251 | 251 | 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase HAMAP MF_01014 | PRO_0000290457 | |||||
Sites | |||||||||
| Active site | 8 | 1 | Proton acceptor By similarity | ||||||
| Active site | 131 | 1 | Proton donor By similarity | ||||||
Sequences
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References
| [1] | "Complete sequence of chromosome 1 of Burkholderia cepacia AMMD." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Pitluck S., Bruce D., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L. Richardson P.Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC BAA-244 / AMMD. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | CP000440 Genomic DNA. Translation: ABI85908.1. |
| RefSeq | YP_772242.1. NC_008390.1. |
3D structure databases | |
| ProteinModelPortal | Q0BIW5. |
| ModBase | Search... |
Protein-protein interaction databases | |
| STRING | Q0BIW5. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| GeneID | 4309241. |
| GenomeReviews | Gene locus Bamb_0348 in contig CP000440_GR. |
| KEGG | bam:Bamb_0348. |
| NMPDR | fig|339670.3.peg.5464. |
| PATRIC | 19016172. VBIBurAmb61564_0403. |
Organism-specific databases | |
| CMR | Search... |
Phylogenomic databases | |
| eggNOG | COG0106. |
| HOGENOM | HBG541613. |
| OMA | DGHCVRL. |
| PhylomeDB | Q0BIW5. |
| ProtClustDB | PRK00748. |
Enzyme and pathway databases | |
| BioCyc | BAMB339670:BAMB_0348-MONOMER. |
Family and domain databases | |
| HAMAP | MF_01014. HisA. [Tree] |
| InterPro | IPR013785. Aldolase_TIM. IPR006062. His_biosynth. IPR006063. HisA. IPR023016. Isoase_HisA. IPR011060. RibuloseP-bd_barrel. [Graphical view] |
| Gene3D | G3DSA:3.20.20.70. Aldolase_TIM. 1 hit. |
| KO | K01814. |
| Pfam | PF00977. His_biosynth. 1 hit. [Graphical view] |
| SUPFAM | SSF51366. RibP_bind_barrel. 1 hit. |
| TIGRFAMs | TIGR00007. TIGR00007. 1 hit. |
| ProtoNet | Search... |
Entry information
| Entry name | HIS4_BURCM | ||||||||
| Accession | Primary (citable) accession number: Q0BIW5 | ||||||||
| Entry history |
| ||||||||
| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Prokaryotic Protein Annotation Program | ||||||||
Relevant documents
| PATHWAY comments Index of metabolic and biosynthesis pathways |
| SIMILARITY comments Index of protein domains and families |

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