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Q0BIF0 (Q0BIF0_BURCM) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 50. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Shikimate dehydrogenase 1 HAMAP MF_00222
EC=1.1.1.25 HAMAP MF_00222
Gene names
Name:aroE1 HAMAP MF_00222
Ordered Locus Names:Bamb_0514
OrganismBurkholderia ambifaria (strain ATCC BAA-244 / AMMD) (Burkholderia cepacia (strain AMMD)) [Complete proteome] [HAMAP]
Taxonomic identifier339670 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Burkholderiaceae › Burkholderia › Burkholderia cepacia complex

Protein attributes

Sequence length288 AA.
Sequence statusComplete.
Protein existenceInferred from homology

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding136 – 1405NADP By similarity HAMAP MF_00222

Sites

Active site741Proton acceptor By similarity HAMAP MF_00222

Sequences

Sequence LengthMass (Da)Tools
Q0BIF0 [UniParc].

Last modified October 17, 2006. Version 1.
Checksum: 6B54786FEFB373B6

FASTA28829,429
        10         20         30         40         50         60 
MTAIAPTSGV DRYVVFGNPV AHSKSPFIHA QFAAQTGEAI TYEHRLAPVD GFEAAVRAFV 

        70         80         90        100        110        120 
AEGGRGANVT VPFKLDAHAL ADTLSPRAAA AGAVNTLRFD ADGRIYGDNT DGVGLVRDIE 

       130        140        150        160        170        180 
SNLGVSLAGA RILLLGAGGA ARGVVLPMLE RAPLSITIVN RTASKAETLV GQFTQAAHDA 

       190        200        210        220        230        240 
GCVLAGGGPD TVRAEPYDVI VNATAGSLDA ALPECDAAAF GAGTLAYDMM YGAQPTVFMQ 

       250        260        270        280 
HAASLGARTA DGLGMLVEQA AESFFIWRGV RPDGAPVLAA LRQALAAA

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References

[1]"Complete sequence of chromosome 1 of Burkholderia cepacia AMMD."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Pitluck S., Bruce D., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L. expand/collapse author list , Kyrpides N., Kim E., Parke J., Coenye T., Konstantinidis K., Ramette A., Tiedje J., Richardson P.
Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000440 Genomic DNA. Translation: ABI86073.1.
RefSeqYP_772407.1. NC_008390.1.

3D structure databases

ProteinModelPortalQ0BIF0.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ0BIF0.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4309178.
GenomeReviewsGene locus Bamb_0514 in contig CP000440_GR.
KEGGbam:Bamb_0514.
NMPDRfig|339670.3.peg.5756.
PATRIC19016526. VBIBurAmb61564_0573.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0169.
HOGENOMHBG553408.
OMAVVFGNPI.
PhylomeDBQ0BIF0.
ProtClustDBPRK00258.

Family and domain databases

HAMAPMF_00222. Shikimate_DH_AroE.
[Tree]
InterProIPR016040. NAD(P)-bd_dom.
IPR011342. Shikimate_DH.
IPR013708. Shikimate_DH-bd_N.
IPR022893. Shikimate_quinate_DH.
IPR006151. Shikm_DH/Glu-tRNA_Rdtase.
[Graphical view]
Gene3DG3DSA:3.40.50.720. NAD(P)-bd. 1 hit.
KOK00014.
PfamPF01488. Shikimate_DH. 1 hit.
PF08501. Shikimate_dh_N. 1 hit.
[Graphical view]
TIGRFAMsTIGR00507. AroE. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ0BIF0_BURCM
AccessionPrimary (citable) accession number: Q0BIF0
Entry history
Integrated into UniProtKB/TrEMBL: October 17, 2006
Last sequence update: October 17, 2006
Last modified: December 14, 2011
This is version 50 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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