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Q0BIC2 (Q0BIC2_BURCM) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 34. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Probable allantoicase 1 HAMAP MF_00813
EC=3.5.3.4 HAMAP MF_00813
Alternative name(s):
Allantoate amidinohydrolase 1 HAMAP MF_00813
Gene names
Name:alc1 HAMAP MF_00813
Ordered Locus Names:Bamb_0542
OrganismBurkholderia ambifaria (strain ATCC BAA-244 / AMMD) (Burkholderia cepacia (strain AMMD)) [Complete proteome] [HAMAP]
Taxonomic identifier339670 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Burkholderiaceae › Burkholderia › Burkholderia cepacia complex

Protein attributes

Sequence length335 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Allantoate + H2O = (S)-ureidoglycolate + urea. HAMAP MF_00813

Pathway

Nitrogen metabolism; (S)-allantoin degradation; (S)-ureidoglycolate from allantoate (aminidohydrolase route): step 1/1. HAMAP MF_00813

Sequence similarities

Belongs to the allantoicase family. HAMAP MF_00813

Ontologies

Keywords
   Biological processPurine metabolism HAMAP MF_00813
   Molecular functionHydrolase HAMAP MF_00813 EMBL ABI86101.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processallantoin catabolic process

Inferred from electronic annotation. Source: HAMAP

purine base metabolic process

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular functionallantoicase activity

Inferred from electronic annotation. Source: HAMAP

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q0BIC2 [UniParc].

Last modified October 17, 2006. Version 1.
Checksum: B277D4253AA55C46

FASTA33536,976
        10         20         30         40         50         60 
MAAPILDPNA PAFTRRYMNL ADPRLGAQAL FASDEFFAPK ERMLNPEPAV FIPGKYDDHG 

        70         80         90        100        110        120 
KWMDGWETRR KRTTGHDFCV VRLARPGVIY GVDLDTSHFT GNFPPAASID ACAVDGDTPP 

       130        140        150        160        170        180 
EDAEWRTLVP ATTLQGNSHH YVGVDDAQPV THLRVNLYPD GGLARLRVYG QPQRDWRHVP 

       190        200        210        220        230        240 
AGELVDLAAI ENGGYLVAAN NQHFGAASQM LMPGRGANMG DGWETRRRRE PGNDWAIVAL 

       250        260        270        280        290        300 
ARPGIIRRVE VDTAFFKGNF PDRCSLQAAR VAGGTDDSLV TQAMFWAELL GEQKLQMDHV 

       310        320        330 
HTFDQLAALG PVTHVRFNIF PDGGVSRLRL WGEPA

« Hide

References

[1]"Complete sequence of chromosome 1 of Burkholderia cepacia AMMD."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Pitluck S., Bruce D., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L. expand/collapse author list , Kyrpides N., Kim E., Parke J., Coenye T., Konstantinidis K., Ramette A., Tiedje J., Richardson P.
Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000440 Genomic DNA. Translation: ABI86101.1.
RefSeqYP_772435.1. NC_008390.1.

3D structure databases

ProteinModelPortalQ0BIC2.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ0BIC2.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4309277.
GenomeReviewsGene locus Bamb_0542 in contig CP000440_GR.
KEGGbam:Bamb_0542.
NMPDRfig|339670.3.peg.5727.
PATRIC19016586. VBIBurAmb61564_0603.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG4266.
HOGENOMHBG480577.
OMADTSYFLG.
PhylomeDBQ0BIC2.
ProtClustDBPRK13257.

Family and domain databases

HAMAPMF_00813. Allantoicase.
[Tree]
InterProIPR005164. Allantoicase.
IPR015908. Allantoicase_dom.
IPR008979. Galactose-bd-like.
[Graphical view]
KOK01477.
PANTHERPTHR12045. Allantoicase. 1 hit.
PfamPF03561. Allantoicase. 2 hits.
[Graphical view]
PIRSFPIRSF016516. Allantoicase. 1 hit.
SUPFAMSSF49785. Gal_bind_like. 2 hits.
TIGRFAMsTIGR02961. Allantoicase. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ0BIC2_BURCM
AccessionPrimary (citable) accession number: Q0BIC2
Entry history
Integrated into UniProtKB/TrEMBL: October 17, 2006
Last sequence update: October 17, 2006
Last modified: December 14, 2011
This is version 34 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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