Q0BI43 (Q0BI43_BURCM) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative uncharacterized protein EMBL ABI86180.1

Gene names

Ordered Locus Names:

Bamb_0621

Organism

Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) (Burkholderia cepacia (strain AMMD)) [Complete proteome] [HAMAP]

Taxonomic identifier

339670 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Burkholderiaceae › Burkholderia › Burkholderia cepacia complex

Protein attributes

Sequence length	268 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor	Pyridoxal phosphate By similarity. PIRSR PIRSR004848-1
Sequence similarities	Belongs to the UPF0001 family. RuleBase RU004514

Ontologies

Keywords
Ligand	Pyridoxal phosphate PIRSR PIRSR004848-1
Technical term	Complete proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Amino acid modifications
	Modified residue	72	1	N6-(pyridoxal phosphate)lysine By similarity PIRSR PIRSR004848-1

Sequences

	Sequence		Length	Mass (Da)
	Q0BI43 [UniParc]. Last modified October 17, 2006. Version 1. Checksum: 09A89A8368E07BA8	FASTA	268	28,764
	10 20 30 40 50 60 MASRPYNGRI DAARAVPHPS PYPPWYPLLV PASVPVMSDF AARLDSVHRR IADAARAAGR 70 80 90 100 110 120 DPATVSLLAV SKTFPADDVR AAHAAGQRAF GENYVQESID KIDALADLRT GLEWHFIGPL 130 140 150 160 170 180 QSNKTRPVAE RFDWVHSVDR LKIAQRLAEQ RPAHLPPLNV CVQVNISGEA SKSGVAPADV 190 200 210 220 230 240 AEVARAVAAL PTLRLRGLMA IPEPAGDTDA QRAPHRALRA LFDTLRADGL PLDTLSMGMS 250 260 ADLEAAVLEG ATIVRVGTAL FGARDYSH

References

[1]

"Complete sequence of chromosome 1 of Burkholderia cepacia AMMD." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Pitluck S., Bruce D., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L. , Kyrpides N., Kim E., Parke J., Coenye T., Konstantinidis K., Ramette A., Tiedje J., Richardson P. Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000440 Genomic DNA. Translation: ABI86180.1.
RefSeq	YP_772514.1. NC_008390.1.
3D structure databases
ProteinModelPortal	Q0BI43.
SMR	Q0BI43. Positions 40-263.
ModBase	Search...
Protein-protein interaction databases
STRING	Q0BI43.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4308656.
GenomeReviews	Gene locus Bamb_0621 in contig CP000440_GR.
KEGG	bam:Bamb_0621.
NMPDR	fig|339670.3.peg.3187.
PATRIC	19016752. VBIBurAmb61564_0686.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0325.
HOGENOM	HBG289671.
OMA	AENREQE.
PhylomeDB	Q0BI43.
ProtClustDB	CLSK942070.
Family and domain databases
InterPro	IPR001608. Ala_racemase_N. IPR011078. UPF0001. [Graphical view]
KO	K06997.
PANTHER	PTHR10146. PP_YBL036C. 1 hit.
Pfam	PF01168. Ala_racemase_N. 1 hit. [Graphical view]
PIRSF	PIRSF004848. YBL036c_PLPDEIII. 1 hit.
TIGRFAMs	TIGR00044. TIGR00044. 1 hit.
PROSITE	PS01211. UPF0001. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q0BI43_BURCM

Accession

Primary (citable) accession number: Q0BI43

Entry history

Integrated into UniProtKB/TrEMBL:	October 17, 2006
Last sequence update:	October 17, 2006
Last modified:	December 14, 2011
This is version 28 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)