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Q0BGU9

- ASTB_BURCM

UniProt

Q0BGU9 - ASTB_BURCM

Protein

N-succinylarginine dihydrolase

Gene

astB

Organism
Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) (Burkholderia cepacia (strain AMMD))
Status
Reviewed - Annotation score: 3 out of 5- Protein inferred from homologyi
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    • History
      Entry version 49 (01 Oct 2014)
      Sequence version 1 (17 Oct 2006)
      Previous versions | rss
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    Functioni

    Catalyzes the hydrolysis of N(2)-succinylarginine into N(2)-succinylornithine, ammonia and CO2.UniRule annotation

    Catalytic activityi

    N(2)-succinyl-L-arginine + 2 H2O = N(2)-succinyl-L-ornithine + 2 NH3 + CO2.UniRule annotation

    Pathwayi

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Binding sitei110 – 1101SubstrateUniRule annotation
    Active sitei174 – 1741UniRule annotation
    Binding sitei213 – 2131SubstrateUniRule annotation
    Active sitei249 – 2491UniRule annotation
    Binding sitei251 – 2511SubstrateUniRule annotation
    Binding sitei364 – 3641SubstrateUniRule annotation
    Active sitei370 – 3701NucleophileUniRule annotation

    GO - Molecular functioni

    1. N-succinylarginine dihydrolase activity Source: UniProtKB-HAMAP

    GO - Biological processi

    1. arginine catabolic process to glutamate Source: UniProtKB-HAMAP
    2. arginine catabolic process to succinate Source: UniProtKB-UniPathway

    Keywords - Molecular functioni

    Hydrolase

    Keywords - Biological processi

    Arginine metabolism

    Enzyme and pathway databases

    BioCyciBAMB339670:GH48-1101-MONOMER.
    UniPathwayiUPA00185; UER00280.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    N-succinylarginine dihydrolaseUniRule annotation (EC:3.5.3.23UniRule annotation)
    Gene namesi
    Name:astBUniRule annotation
    Ordered Locus Names:Bamb_1065
    OrganismiBurkholderia ambifaria (strain ATCC BAA-244 / AMMD) (Burkholderia cepacia (strain AMMD))
    Taxonomic identifieri339670 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderiaBurkholderia cepacia complex
    ProteomesiUP000000662: Chromosome 1

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 446446N-succinylarginine dihydrolasePRO_1000065715Add
    BLAST

    Interactioni

    Subunit structurei

    Homodimer.UniRule annotation

    Protein-protein interaction databases

    STRINGi339670.Bamb_1065.

    Structurei

    3D structure databases

    ProteinModelPortaliQ0BGU9.
    SMRiQ0BGU9. Positions 2-446.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Region

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Regioni19 – 2810Substrate bindingUniRule annotation
    Regioni137 – 1382Substrate bindingUniRule annotation

    Sequence similaritiesi

    Belongs to the succinylarginine dihydrolase family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG3724.
    HOGENOMiHOG000226005.
    KOiK01484.
    OMAiREVNFDG.
    OrthoDBiEOG6B8XDW.

    Family and domain databases

    Gene3Di3.75.10.20. 1 hit.
    HAMAPiMF_01172. AstB.
    InterProiIPR007079. SuccinylArg_d-Hdrlase_AstB.
    [Graphical view]
    PfamiPF04996. AstB. 1 hit.
    [Graphical view]
    TIGRFAMsiTIGR03241. arg_catab_astB. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q0BGU9-1 [UniParc]FASTAAdd to Basket

    « Hide

    MNAQEANFDG LVGPTHNYAG LSFGNVASLN NEKSAANPKA AAKQGLRKMK    50
    QLADLGFAQG VLPPQERPSL RLLRELGFSG KDADVIAKAA KQAPELLAAA 100
    SSASAMWTAN AATVSPSADT GDGRVHFTPA NLCSKLHRAI EHDATRRTLS 150
    TLFADPAHFA VHEALTGTPA LGDEGAANHT RFCAEYGKPG VEFFVYGRAE 200
    YRRGPEPKRF PARQTFEASR AVAQRHGLDE TATVYAQQDP DVIDAGVFHN 250
    DVISVGNRDT LFTHERAFVN KQAIYDTLTA TLDARGARLN VIEVPDAAVS 300
    VNDAVTSYLF NSQLLSRADG SQVLVVPQEC RENAKVAAYL DELAAGNGPI 350
    RDVLVFDLRE SMKNGGGPAC LRLRVVLNDA ERAAVTSNVW MNDTLFASLD 400
    AWIEKHYRDR LAPEDLADPT LLDESRTALD ELTQILRVGS LYDFQR 446
    Length:446
    Mass (Da):48,330
    Last modified:October 17, 2006 - v1
    Checksum:i9C8CAD015D021187
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000440 Genomic DNA. Translation: ABI86624.1.
    RefSeqiYP_772958.1. NC_008390.1.

    Genome annotation databases

    EnsemblBacteriaiABI86624; ABI86624; Bamb_1065.
    GeneIDi4311246.
    KEGGibam:Bamb_1065.
    PATRICi19017696. VBIBurAmb61564_1144.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000440 Genomic DNA. Translation: ABI86624.1 .
    RefSeqi YP_772958.1. NC_008390.1.

    3D structure databases

    ProteinModelPortali Q0BGU9.
    SMRi Q0BGU9. Positions 2-446.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 339670.Bamb_1065.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABI86624 ; ABI86624 ; Bamb_1065 .
    GeneIDi 4311246.
    KEGGi bam:Bamb_1065.
    PATRICi 19017696. VBIBurAmb61564_1144.

    Phylogenomic databases

    eggNOGi COG3724.
    HOGENOMi HOG000226005.
    KOi K01484.
    OMAi REVNFDG.
    OrthoDBi EOG6B8XDW.

    Enzyme and pathway databases

    UniPathwayi UPA00185 ; UER00280 .
    BioCyci BAMB339670:GH48-1101-MONOMER.

    Family and domain databases

    Gene3Di 3.75.10.20. 1 hit.
    HAMAPi MF_01172. AstB.
    InterProi IPR007079. SuccinylArg_d-Hdrlase_AstB.
    [Graphical view ]
    Pfami PF04996. AstB. 1 hit.
    [Graphical view ]
    TIGRFAMsi TIGR03241. arg_catab_astB. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Complete sequence of chromosome 1 of Burkholderia cepacia AMMD."
      Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Pitluck S., Bruce D., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L.
      , Kyrpides N., Kim E., Parke J., Coenye T., Konstantinidis K., Ramette A., Tiedje J., Richardson P.
      Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC BAA-244 / AMMD.

    Entry informationi

    Entry nameiASTB_BURCM
    AccessioniPrimary (citable) accession number: Q0BGU9
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: February 5, 2008
    Last sequence update: October 17, 2006
    Last modified: October 1, 2014
    This is version 49 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome

    Documents

    1. PATHWAY comments
      Index of metabolic and biosynthesis pathways
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3