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Q0BGB8 (Q0BGB8_BURCM) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 47. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length609 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Ontologies

Keywords
   DomainSignal EMBL ABI86805.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processchemotaxis

Inferred from electronic annotation. Source: InterPro

   Cellular_componentintegral component of membrane

Inferred from electronic annotation. Source: InterPro

   Molecular_functionsignal transducer activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2323 Potential EMBL ABI86805.1
Chain24 – 609586 Potential EMBL ABI86805.1
PRO_5000127361

Sequences

Sequence LengthMass (Da)Tools
Q0BGB8 [UniParc].

Last modified October 17, 2006. Version 1.
Checksum: 30EBBCE09D25A58C

FASTA60962,855
        10         20         30         40         50         60 
MLSSIRARIV ATCVAIVVTA LAVTGGLVYQ VVKRHNDETI DRNLQSVLAG HALALDEWVA 

        70         80         90        100        110        120 
GRAQQTQALA DTLAVGEGDP LPALTLLGKS GGFQVLTLGL PDHTAFSNIP LAPGYDPTAR 

       130        140        150        160        170        180 
PWYKQAVEAG RLVVTALYQD ASTGKPAFAF AVPIMRGGTL KGVLAASLYM ERASAIVASM 

       190        200        210        220        230        240 
HPTPASFAFL VDRGGRLIAG AKTDLIMKPA VQLSPELTPE HLASLQSASE PVAIAVDGVT 

       250        260        270        280        290        300 
KLLRAQPIAG TDWSLVMALD RSDVTAGMRA VATTTLVAIV IVACIAAALV GALTNAAFKR 

       310        320        330        340        350        360 
VLLVRDALTD VASGSGDLTK RLRADGNDEA AQIARAFNLF AEKISAILLQ IRGFSESVSV 

       370        380        390        400        410        420 
ASAEIAQGNQ DLSGRTEHAA SSLQETAAAL EEIAGTARNS ADAATQVNRL AESASGVAMR 

       430        440        450        460        470        480 
GGEVVSQVVA TMGEITAASN EISNIIGVID GIAFQTNILA LNAAVEAARA NEHGRGFAVV 

       490        500        510        520        530        540 
AGEVRTLAQR SAQAAKEIKQ LIQASVDKIE GGSGLVHTAG ATMDEIVEGV RGITSVIAEM 

       550        560        570        580        590        600 
TVAANEQSTG LAQVNQAVSQ LDHSTQQNAA LVEESAAAAA LLREQAAQLA QIVGEFKLAQ 


PQTADTARV 

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References

[1]"Complete sequence of chromosome 1 of Burkholderia cepacia AMMD."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Pitluck S., Bruce D., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L. expand/collapse author list , Kyrpides N., Kim E., Parke J., Coenye T., Konstantinidis K., Ramette A., Tiedje J., Richardson P.
Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC BAA-244 / AMMD.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000440 Genomic DNA. Translation: ABI86805.1.
RefSeqYP_773139.1. NC_008390.1.

3D structure databases

ProteinModelPortalQ0BGB8.
SMRQ0BGB8. Positions 375-600.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING339670.Bamb_1247.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABI86805; ABI86805; Bamb_1247.
GeneID4309420.
KEGGbam:Bamb_1247.
PATRIC19018072. VBIBurAmb61564_1330.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0840.
HOGENOMHOG000148074.
KOK03406.
OMANTIRIKD.
OrthoDBEOG6G4VQG.

Enzyme and pathway databases

BioCycBAMB339670:GH48-1285-MONOMER.

Family and domain databases

InterProIPR004010. Cache_domain.
IPR004090. Chemotax_Me-accpt_rcpt.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
IPR029151. Sensor-like.
[Graphical view]
PfamPF02743. Cache_1. 1 hit.
PF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
PRINTSPR00260. CHEMTRNSDUCR.
SMARTSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
SUPFAMSSF103190. SSF103190. 1 hit.
PROSITEPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ0BGB8_BURCM
AccessionPrimary (citable) accession number: Q0BGB8
Entry history
Integrated into UniProtKB/TrEMBL: October 17, 2006
Last sequence update: October 17, 2006
Last modified: June 11, 2014
This is version 47 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)