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Reviewed, UniProtKB/Swiss-Prot Q0BFR5 (RPIA_BURCM)

Last modified February 9, 2010. Version 25. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents

Names and origin

Protein namesRecommended name:
    Ribose-5-phosphate isomerase A
    EC=5.3.1.6
Alternative name(s):
    Phosphoriboisomerase A
      Short name=PRI
Gene names
Name: rpiA
Ordered Locus Names: Bamb_1450
OrganismBurkholderia ambifaria (strain ATCC BAA-244 / AMMD) (Burkholderia cepacia (strain AMMD)) [Complete proteome] [HAMAP]
Taxonomic identifier339670 [NCBI]
Taxonomic lineageBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderiaBurkholderia cepacia complex

Protein attributes

Sequence length230 AA.
Sequence statusComplete.
Protein existenceInferred from homology.

General annotation (Comments)

Ontologies

Keywords
   Molecular functionIsomerase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processpentose-phosphate shunt, non-oxidative branch

Inferred from electronic annotation. Source: HAMAP

   Molecular functionribose-5-phosphate isomerase activity

Inferred from electronic annotation. Source: HAMAP

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 230230Ribose-5-phosphate isomerase A HAMAP MF_00170
PRO_1000016908

Sequences

Sequence LengthMass (Da)Tools
Q0BFR5-1 [UniParc].

Last modified October 17, 2006. Version 1.
Checksum: 7FA298D58B894D87

FASTA23023,891
        10         20         30         40         50         60 
MTQDELKRLV GQAAADYVIQ NVPEGAVIGV GTGSTANCFI DALAAVKARY RGAVSSSLAT 

        70         80         90        100        110        120 
TERLKSHGIK VFDLNEIESL QVYVDGADEI DASGAMIKGG GGALTREKIV ASVADTFVCI 

       130        140        150        160        170        180 
ADASKRVPVL GAFPLPIEVV PMARTAIGRR VTALGGVPVL RVTKDGAPYI TDNGNEIIDV 

       190        200        210        220        230 
KGLQIADPRG FEAQVNAWPG VVTVGLFAER GANLCLLGTP NGVETIVYPA 

« Hide

References

[1]"Complete sequence of chromosome 1 of Burkholderia cepacia AMMD."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Pitluck S., Bruce D., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L. expand/collapse author list , Kyrpides N., Kim E., Parke J., Coenye T., Konstantinidis K., Ramette A., Tiedje J., Richardson P.
Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000440 Genomic DNA. Translation: ABI87008.1.
RefSeqYP_773342.1.

3D structure databases

SMRQ0BFR5. Positions 1-227.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ0BFR5.

Genome annotation databases

GeneID4309901.
GenomeReviewsGene locus Bamb_1450 in contig CP000440_GR.
KEGGbam:Bamb_1450.
NMPDRfig|339670.3.peg.2999.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0120.
HOGENOMHBG515603.
OMAVFDLNSV.

Family and domain databases

HAMAPMF_00170. Rib_5P_isom_A.
[Tree]
InterProIPR004788. Ribose5P_isomerase_typA.
IPR020672. Ribose5P_isomerase_typA_subgr.
[Graphical view]
PANTHERPTHR11934. RpiA. 1 hit.
PfamPF06026. Rib_5-P_isom_A. 1 hit.
[Graphical view]
TIGRFAMsTIGR00021. rpiA. 1 hit.
ProtoNetSearch...

Entry information

Entry nameRPIA_BURCM
AccessionPrimary (citable) accession number: Q0BFR5
Entry history
Integrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: October 17, 2006
Last modified: February 9, 2010
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation projectHAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)

Relevant documents

PATHWAY comments

Index of metabolic and biosynthesis pathways

SIMILARITY comments

Index of protein domains and families

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents