Reviewed, UniProtKB/Swiss-Prot Q0BFR5 (RPIA_BURCM)

Names and origin

Protein names

Recommended name:
    Ribose-5-phosphate isomerase A
    EC=5.3.1.6
Alternative name(s):
    Phosphoriboisomerase A
      Short name=PRI

Gene names

Name:	rpiA
Ordered Locus Names:	Bamb_1450

Organism

Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) (Burkholderia cepacia (strain AMMD)) [Complete proteome] [HAMAP]

Taxonomic identifier

339670 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Burkholderiaceae › Burkholderia › Burkholderia cepacia complex

Protein attributes

Sequence length	230 AA.
Sequence status	Complete.
Protein existence	Inferred from homology.

General annotation (Comments)

Catalytic activity	D-ribose 5-phosphate = D-ribulose 5-phosphate. HAMAP MF_00170
Pathway	Carbohydrate degradation; pentose phosphate pathway; D-ribose 5-phosphate from D-ribulose 5-phosphate (non-oxidative stage): step 1/1. HAMAP MF_00170
Sequence similarities	Belongs to the ribose 5-phosphate isomerase family.

Ontologies

Keywords
Molecular function	Isomerase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	pentose-phosphate shunt, non-oxidative branch Inferred from electronic annotation. Source: HAMAP
Molecular function	ribose-5-phosphate isomerase activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 230	230	Ribose-5-phosphate isomerase A HAMAP MF_00170		PRO_1000016908

Sequences

	Sequence		Length	Mass (Da)
	Q0BFR5-1 [UniParc]. Last modified October 17, 2006. Version 1. Checksum: 7FA298D58B894D87	FASTA	230	23,891
	10 20 30 40 50 60 MTQDELKRLV GQAAADYVIQ NVPEGAVIGV GTGSTANCFI DALAAVKARY RGAVSSSLAT 70 80 90 100 110 120 TERLKSHGIK VFDLNEIESL QVYVDGADEI DASGAMIKGG GGALTREKIV ASVADTFVCI 130 140 150 160 170 180 ADASKRVPVL GAFPLPIEVV PMARTAIGRR VTALGGVPVL RVTKDGAPYI TDNGNEIIDV 190 200 210 220 230 KGLQIADPRG FEAQVNAWPG VVTVGLFAER GANLCLLGTP NGVETIVYPA

References

[1]

"Complete sequence of chromosome 1 of Burkholderia cepacia AMMD." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Pitluck S., Bruce D., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L. , Kyrpides N., Kim E., Parke J., Coenye T., Konstantinidis K., Ramette A., Tiedje J., Richardson P. Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000440 Genomic DNA. Translation: ABI87008.1.
RefSeq	YP_773342.1.
3D structure databases
SMR	Q0BFR5. Positions 1-227.
ModBase	Search...
Protein-protein interaction databases
STRING	Q0BFR5.
Genome annotation databases
GeneID	4309901.
GenomeReviews	Gene locus Bamb_1450 in contig CP000440_GR.
KEGG	bam:Bamb_1450.
NMPDR	fig|339670.3.peg.2999.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0120.
HOGENOM	HBG515603.
OMA	VFDLNSV.
Family and domain databases
HAMAP	MF_00170. Rib_5P_isom_A. [Tree]
InterPro	IPR004788. Ribose5P_isomerase_typA. IPR020672. Ribose5P_isomerase_typA_subgr. [Graphical view]
PANTHER	PTHR11934. RpiA. 1 hit.
Pfam	PF06026. Rib_5-P_isom_A. 1 hit. [Graphical view]
TIGRFAMs	TIGR00021. rpiA. 1 hit.
ProtoNet	Search...

Entry information

Entry name

RPIA_BURCM

Accession

Primary (citable) accession number: Q0BFR5

Entry history

Integrated into UniProtKB/Swiss-Prot:	January 15, 2008
Last sequence update:	October 17, 2006
Last modified:	February 9, 2010
This is version 25 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation project

HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)