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Q0BCX1

- Q0BCX1_BURCM

UniProt

Q0BCX1 - Q0BCX1_BURCM

Protein
Submitted name:

Two component transcriptional regulator, winged helix family

Gene

Bamb_2446

Organism
Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) (Burkholderia cepacia (strain AMMD))
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 51 (01 Oct 2014)
      Sequence version 1 (17 Oct 2006)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. DNA binding Source: UniProtKB-KW
    2. phosphorelay response regulator activity Source: InterPro

    GO - Biological processi

    1. regulation of transcription, DNA-templated Source: UniProtKB-KW
    2. transcription, DNA-templated Source: UniProtKB-KW

    Keywords - Biological processi

    Transcription, Transcription regulationSAAS annotation, Two-component regulatory systemSAAS annotation

    Keywords - Ligandi

    DNA-bindingSAAS annotation

    Enzyme and pathway databases

    BioCyciBAMB339670:GH48-2513-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Two component transcriptional regulator, winged helix familyImported
    Gene namesi
    Ordered Locus Names:Bamb_2446Imported
    OrganismiBurkholderia ambifaria (strain ATCC BAA-244 / AMMD) (Burkholderia cepacia (strain AMMD))Imported
    Taxonomic identifieri339670 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderiaBurkholderia cepacia complex
    ProteomesiUP000000662: Chromosome 1

    PTM / Processingi

    Keywords - PTMi

    PhosphoproteinSAAS annotation

    Interactioni

    Protein-protein interaction databases

    STRINGi339670.Bamb_2446.

    Structurei

    3D structure databases

    ProteinModelPortaliQ0BCX1.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Contains response regulatory domain.SAAS annotation

    Phylogenomic databases

    eggNOGiCOG0745.
    HOGENOMiHOG000034819.
    KOiK07659.
    OMAiHPMRTLT.
    OrthoDBiEOG6G4VQG.

    Family and domain databases

    Gene3Di1.10.10.10. 1 hit.
    InterProiIPR011006. CheY-like_superfamily.
    IPR001867. Sig_transdc_resp-reg_C.
    IPR016032. Sig_transdc_resp-reg_C-effctor.
    IPR001789. Sig_transdc_resp-reg_receiver.
    IPR011991. WHTH_DNA-bd_dom.
    [Graphical view]
    PfamiPF00072. Response_reg. 1 hit.
    PF00486. Trans_reg_C. 1 hit.
    [Graphical view]
    SMARTiSM00448. REC. 1 hit.
    SM00862. Trans_reg_C. 1 hit.
    [Graphical view]
    SUPFAMiSSF46894. SSF46894. 1 hit.
    SSF52172. SSF52172. 1 hit.
    PROSITEiPS50110. RESPONSE_REGULATORY. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q0BCX1-1 [UniParc]FASTAAdd to Basket

    « Hide

    MPHSRGKLQA MTTQILIVDD DQELRDLLRD YLVRQGMEVS VLHDAATLEK    50
    RLERERPDLI VLDLMMPGVD GLTALRQLRA AGDDIPVIML TARADDVDRI 100
    VGLELGADDY LGKPFNPREL LARVQAVLRR RRATPSAAAP EQREPFAFGR 150
    FVLDFQARTL SVDGKPATLS SSEFALLKIF VNHALRTLTR ERLLELLHGP 200
    EYDGTDRGID VQVWRLRRIL ETDPSAPRFI QTVRGRGYVF VPDGEAHAQA 250
    H 251
    Length:251
    Mass (Da):28,304
    Last modified:October 17, 2006 - v1
    Checksum:i30B3B94B70D12325
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000440 Genomic DNA. Translation: ABI88002.1.
    RefSeqiYP_774336.1. NC_008390.1.

    Genome annotation databases

    EnsemblBacteriaiABI88002; ABI88002; Bamb_2446.
    GeneIDi4308833.
    KEGGibam:Bamb_2446.
    PATRICi19020566. VBIBurAmb61564_2547.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000440 Genomic DNA. Translation: ABI88002.1 .
    RefSeqi YP_774336.1. NC_008390.1.

    3D structure databases

    ProteinModelPortali Q0BCX1.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 339670.Bamb_2446.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABI88002 ; ABI88002 ; Bamb_2446 .
    GeneIDi 4308833.
    KEGGi bam:Bamb_2446.
    PATRICi 19020566. VBIBurAmb61564_2547.

    Phylogenomic databases

    eggNOGi COG0745.
    HOGENOMi HOG000034819.
    KOi K07659.
    OMAi HPMRTLT.
    OrthoDBi EOG6G4VQG.

    Enzyme and pathway databases

    BioCyci BAMB339670:GH48-2513-MONOMER.

    Family and domain databases

    Gene3Di 1.10.10.10. 1 hit.
    InterProi IPR011006. CheY-like_superfamily.
    IPR001867. Sig_transdc_resp-reg_C.
    IPR016032. Sig_transdc_resp-reg_C-effctor.
    IPR001789. Sig_transdc_resp-reg_receiver.
    IPR011991. WHTH_DNA-bd_dom.
    [Graphical view ]
    Pfami PF00072. Response_reg. 1 hit.
    PF00486. Trans_reg_C. 1 hit.
    [Graphical view ]
    SMARTi SM00448. REC. 1 hit.
    SM00862. Trans_reg_C. 1 hit.
    [Graphical view ]
    SUPFAMi SSF46894. SSF46894. 1 hit.
    SSF52172. SSF52172. 1 hit.
    PROSITEi PS50110. RESPONSE_REGULATORY. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete sequence of chromosome 1 of Burkholderia cepacia AMMD."
      Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Pitluck S., Bruce D., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L.
      , Kyrpides N., Kim E., Parke J., Coenye T., Konstantinidis K., Ramette A., Tiedje J., Richardson P.
      Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC BAA-244 / AMMDImported.

    Entry informationi

    Entry nameiQ0BCX1_BURCM
    AccessioniPrimary (citable) accession number: Q0BCX1
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 17, 2006
    Last sequence update: October 17, 2006
    Last modified: October 1, 2014
    This is version 51 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3