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Q0BCF6 (Q0BCF6_BURCM) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 28. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
N-acetylmuramoyl-L-alanine amidase EMBL ABI88167.1
EC=3.5.1.28 EMBL ABI88167.1
Gene names
Ordered Locus Names:Bamb_2611
OrganismBurkholderia ambifaria (strain ATCC BAA-244 / AMMD) (Burkholderia cepacia (strain AMMD)) [Complete proteome] [HAMAP]
Taxonomic identifier339670 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Burkholderiaceae › Burkholderia › Burkholderia cepacia complex

Protein attributes

Sequence length505 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Ontologies

Keywords
   DomainSignal EMBL ABI88167.1
   Molecular functionHydrolase EMBL ABI88167.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processpeptidoglycan catabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular functionN-acetylmuramoyl-L-alanine amidase activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 4545 Potential EMBL ABI88167.1
Chain46 – 505460 Potential EMBL ABI88167.1
PRO_5000127605

Sequences

Sequence LengthMass (Da)Tools
Q0BCF6 [UniParc].

Last modified October 17, 2006. Version 1.
Checksum: C9E4557ADD1C0BC3

FASTA50554,461
        10         20         30         40         50         60 
MLIKPFRSIE SAATATHNWR RRQILRAGAS TLVLGLAAPR LAHASSVLGV RVWPARDYTR 

        70         80         90        100        110        120 
VTIESDQPLQ NSQQLLQGPD RLVVDLSGLD LDQALRDLVS KIAPNDPQIQ SVRVGQYQPH 

       130        140        150        160        170        180 
VVRMVFDLKG SVKPQVFTLP PVGTYKYRLV FDLYPAVAPD PLSDLIAQTE RKEQALNDTA 

       190        200        210        220        230        240 
RAQQMQPPTS LAGPAAPSAP AAGDNTDAFF QRFAQNTPAT PRTPPAAATP STPAKPAVKP 

       250        260        270        280        290        300 
PPVIARRDDS DDDGDTYKFT APKSGKGGTM RLLTVAIDPG HGGEDPGAIG GGGTYEKHIA 

       310        320        330        340        350        360 
LDIAKKLRAK IDGAPNMRAM MTRDADFFVP LNVRVQKARR VGADLFVSIH ADAFTTPSAR 

       370        380        390        400        410        420 
GSSVFALSDH GATSAAARWM ANKENSSDLI GGINIKTQDA AVSRALFDMS TTAQIRDSLR 

       430        440        450        460        470        480 
YGGYVLKEVG GINKLHKGSV EQAGFAVLKA PDIPSILVET AFISNPEEES RLNDESYRDQ 

       490        500 
MADAIFRGIK RYFAANPPLA KNRMA

« Hide

References

[1]"Complete sequence of chromosome 1 of Burkholderia cepacia AMMD."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Pitluck S., Bruce D., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L. expand/collapse author list , Kyrpides N., Kim E., Parke J., Coenye T., Konstantinidis K., Ramette A., Tiedje J., Richardson P.
Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000440 Genomic DNA. Translation: ABI88167.1.
RefSeqYP_774501.1. NC_008390.1.

3D structure databases

ProteinModelPortalQ0BCF6.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ0BCF6.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4311336.
GenomeReviewsGene locus Bamb_2611 in contig CP000440_GR.
KEGGbam:Bamb_2611.
NMPDRfig|339670.3.peg.5294.
PATRIC19020928. VBIBurAmb61564_2727.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0860.
HOGENOMHBG656726.
OMAVWPAEDY.
PhylomeDBQ0BCF6.
ProtClustDBCLSK930436.

Family and domain databases

InterProIPR021731. AMIN.
IPR002508. CW_Hdrlase/autolysin_cat.
[Graphical view]
Gene3DG3DSA:3.40.630.40. Cell_wall_OHase/autolysin_cat. 2 hits.
KOK01448.
PfamPF01520. Amidase_3. 1 hit.
PF11741. AMIN. 1 hit.
[Graphical view]
SMARTSM00646. Ami_3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ0BCF6_BURCM
AccessionPrimary (citable) accession number: Q0BCF6
Entry history
Integrated into UniProtKB/TrEMBL: October 17, 2006
Last sequence update: October 17, 2006
Last modified: December 14, 2011
This is version 28 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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