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Q0BCD4 (Q0BCD4_BURCM) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 39. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Bamb_2633
OrganismBurkholderia ambifaria (strain ATCC BAA-244 / AMMD) (Burkholderia cepacia (strain AMMD)) [Complete proteome] [HAMAP]
Taxonomic identifier339670 [NCBI]
Taxonomic lineageBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderiaBurkholderia cepacia complex

Protein attributes

Sequence length464 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
Q0BCD4 [UniParc].

Last modified October 17, 2006. Version 1.
Checksum: 083A1416F610249B

FASTA46450,539
        10         20         30         40         50         60 
MTESPSARTP VLLHIGAGSF HRAHQAWYLH RVNAAVPAGE RWSLTVGNIR DDMRATMDAL 

        70         80         90        100        110        120 
AAQHGAYTLE TVTPQGERAY ETIRAISRVL PWSIDLAALI EAGADAACRI VSFTVTEGGY 

       130        140        150        160        170        180 
YLDEHNRLDI ANADLAADLQ GARTTLYGAL AALLAERVAR GAGPLTLQSC DNLRNNGARF 

       190        200        210        220        230        240 
RAGMREFLER RGEAGLLAWF DANVATPSAM VDRITPRPTD DVRERVRAAT GADDACPVMG 

       250        260        270        280        290        300 
ESFIQWVIED RFAAGRPRWE LAGAELVDDV HPYEEAKIRI LNATHSCIAW AGTLAGHTYI 

       310        320        330        340        350        360 
HEGTHDAAIR RFAHDYVTQD VIPCLSPSPL DLERYRDVVL ERFGNPYVLD TNQRVAADGF 

       370        380        390        400        410        420 
SKIPGFIAPT LVESFARGAA PVATAVLPAL FLRFLERWAR GLLPYAYQDG VMDDGTARAI 

       430        440        450        460 
VEADDPVVAL CASRALWGSL AGNAALFDAL RAGLARVDAW LAQR 

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References

[1]"Complete sequence of chromosome 1 of Burkholderia cepacia AMMD."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Pitluck S., Bruce D., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L. expand/collapse author list , Kyrpides N., Kim E., Parke J., Coenye T., Konstantinidis K., Ramette A., Tiedje J., Richardson P.
Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000440 Genomic DNA. Translation: ABI88189.1.
RefSeqYP_774523.1. NC_008390.1.

3D structure databases

ProteinModelPortalQ0BCD4.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ0BCD4.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4311358.
GenomeReviewsGene locus Bamb_2633 in contig CP000440_GR.
KEGGbam:Bamb_2633.
NMPDRfig|339670.3.peg.5315.
PATRIC19020976. VBIBurAmb61564_2751.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0246.
HOGENOMHBG510279.
OMAIARVLPW.
PhylomeDBQ0BCD4.
ProtClustDBCLSK889158.

Family and domain databases

InterProIPR008927. 6-PGluconate_DH_C-like.
IPR013328. DH_multihelical.
IPR000669. Mannitol_DH.
IPR013118. Mannitol_DH_C.
IPR013131. Mannitol_DH_N.
IPR016040. NAD(P)-bd_dom.
[Graphical view]
Gene3DG3DSA:3.40.50.720. NAD(P)-bd. 1 hit.
G3DSA:1.10.1040.10. Opine_DH. 1 hit.
KOK00007.
PfamPF01232. Mannitol_dh. 1 hit.
PF08125. Mannitol_dh_C. 1 hit.
[Graphical view]
PRINTSPR00084. MTLDHDRGNASE.
SUPFAMSSF48179. 6DGDH_C_like. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ0BCD4_BURCM
AccessionPrimary (citable) accession number: Q0BCD4
Entry history
Integrated into UniProtKB/TrEMBL: October 17, 2006
Last sequence update: October 17, 2006
Last modified: December 14, 2011
This is version 39 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)