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Protein
Submitted name:

Methyl-accepting chemotaxis sensory transducer

Gene

Bamb_2891

Organism
Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) (Burkholderia cepacia (strain AMMD))
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

BioCyciBAMB339670:GH48-2960-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Methyl-accepting chemotaxis sensory transducerImported
Gene namesi
Ordered Locus Names:Bamb_2891Imported
OrganismiBurkholderia ambifaria (strain ATCC BAA-244 / AMMD) (Burkholderia cepacia (strain AMMD))Imported
Taxonomic identifieri339670 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderiaBurkholderia cepacia complex
ProteomesiUP000000662 Componenti: Chromosome 1

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2929 PotentialImportedAdd
BLAST
Chaini30 – 521492 PotentialImportedPRO_5000127663Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi339670.Bamb_2891.

Family & Domainsi

Keywords - Domaini

SignalImported

Phylogenomic databases

eggNOGiCOG0840.
HOGENOMiHOG000148074.
KOiK03406.
OMAiVYPTIVN.
OrthoDBiEOG6G4VQG.

Family and domain databases

InterProiIPR004010. Cache_domain.
IPR004090. Chemotax_Me-accpt_rcpt.
IPR004091. Chemotax_Me-accpt_rcpt_Me-site.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamiPF08269. Cache_2. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
PRINTSiPR00260. CHEMTRNSDUCR.
SMARTiSM01049. Cache_2. 1 hit.
SM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEiPS00538. CHEMOTAXIS_TRANSDUC_1. 1 hit.
PS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q0BBM6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSRMSLNRKL WLALALVWIG LLGVGAWSAY ETRATMLAER KAGIANLVES
60 70 80 90 100
AAGIVNAYHA LAQSGTLPEA DAKRDALASL AAMRYGESGY VFVMDSKPVV
110 120 130 140 150
LMHPTLPKLV GTQVGDYLDP DGKPLFVTIL NAAKATGSGF AEYRGRLPHS
160 170 180 190 200
ETAVPKISYV TRFAPWDWNI SSGVFLKDID TVYYRTLFGH LAVVLVIGFV
210 220 230 240 250
ISAAMLVIIR NVRGRLGGEP DEAAALASRI AQGDLTRPVP VRAGDSTSMM
260 270 280 290 300
AAMHDMQARL QATIGGIRQA AESIASASRE IASGNDDLSQ RTEEQAASLE
310 320 330 340 350
ETAASMEQLT ATVKQNADNA RQASGLANNA SEIARAGNDV VNRVIGTMGE
360 370 380 390 400
IDDSSRKIAD IIGVIEGIAF QTNILALNAA VEAARAGEQG RGFAVVAGEV
410 420 430 440 450
RSLAQRSATA AKEIRELIVA SVERVRNGST LVGQAGTTMG EILQAVARVT
460 470 480 490 500
DIMGEIAAAS EEQASGITQV GRAVTQMDQV TQQNAALVEE AAAAAASLQE
510 520
QAGRLRGAIG AFRVGDAGGL R
Length:521
Mass (Da):54,714
Last modified:October 17, 2006 - v1
Checksum:i94C7A51298EADE5B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000440 Genomic DNA. Translation: ABI88447.1.
RefSeqiWP_011657996.1. NC_008390.1.
YP_774781.1. NC_008390.1.

Genome annotation databases

EnsemblBacteriaiABI88447; ABI88447; Bamb_2891.
KEGGibam:Bamb_2891.
PATRICi19021530. VBIBurAmb61564_3026.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000440 Genomic DNA. Translation: ABI88447.1.
RefSeqiWP_011657996.1. NC_008390.1.
YP_774781.1. NC_008390.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi339670.Bamb_2891.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABI88447; ABI88447; Bamb_2891.
KEGGibam:Bamb_2891.
PATRICi19021530. VBIBurAmb61564_3026.

Phylogenomic databases

eggNOGiCOG0840.
HOGENOMiHOG000148074.
KOiK03406.
OMAiVYPTIVN.
OrthoDBiEOG6G4VQG.

Enzyme and pathway databases

BioCyciBAMB339670:GH48-2960-MONOMER.

Family and domain databases

InterProiIPR004010. Cache_domain.
IPR004090. Chemotax_Me-accpt_rcpt.
IPR004091. Chemotax_Me-accpt_rcpt_Me-site.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamiPF08269. Cache_2. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
PRINTSiPR00260. CHEMTRNSDUCR.
SMARTiSM01049. Cache_2. 1 hit.
SM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEiPS00538. CHEMOTAXIS_TRANSDUC_1. 1 hit.
PS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of chromosome 1 of Burkholderia cepacia AMMD."
    Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Pitluck S., Bruce D., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L.
    , Kyrpides N., Kim E., Parke J., Coenye T., Konstantinidis K., Ramette A., Tiedje J., Richardson P.
    Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC BAA-244 / AMMDImported.

Entry informationi

Entry nameiQ0BBM6_BURCM
AccessioniPrimary (citable) accession number: Q0BBM6
Entry historyi
Integrated into UniProtKB/TrEMBL: October 17, 2006
Last sequence update: October 17, 2006
Last modified: June 24, 2015
This is version 55 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.