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Q0BBM6 (Q0BBM6_BURCM) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 45. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length521 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Ontologies

Keywords
   DomainSignal EMBL ABI88447.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processchemotaxis

Inferred from electronic annotation. Source: InterPro

   Cellular_componentintegral component of membrane

Inferred from electronic annotation. Source: InterPro

   Molecular_functionsignal transducer activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2929 Potential EMBL ABI88447.1
Chain30 – 521492 Potential EMBL ABI88447.1
PRO_5000127663

Sequences

Sequence LengthMass (Da)Tools
Q0BBM6 [UniParc].

Last modified October 17, 2006. Version 1.
Checksum: 94C7A51298EADE5B

FASTA52154,714
        10         20         30         40         50         60 
MSRMSLNRKL WLALALVWIG LLGVGAWSAY ETRATMLAER KAGIANLVES AAGIVNAYHA 

        70         80         90        100        110        120 
LAQSGTLPEA DAKRDALASL AAMRYGESGY VFVMDSKPVV LMHPTLPKLV GTQVGDYLDP 

       130        140        150        160        170        180 
DGKPLFVTIL NAAKATGSGF AEYRGRLPHS ETAVPKISYV TRFAPWDWNI SSGVFLKDID 

       190        200        210        220        230        240 
TVYYRTLFGH LAVVLVIGFV ISAAMLVIIR NVRGRLGGEP DEAAALASRI AQGDLTRPVP 

       250        260        270        280        290        300 
VRAGDSTSMM AAMHDMQARL QATIGGIRQA AESIASASRE IASGNDDLSQ RTEEQAASLE 

       310        320        330        340        350        360 
ETAASMEQLT ATVKQNADNA RQASGLANNA SEIARAGNDV VNRVIGTMGE IDDSSRKIAD 

       370        380        390        400        410        420 
IIGVIEGIAF QTNILALNAA VEAARAGEQG RGFAVVAGEV RSLAQRSATA AKEIRELIVA 

       430        440        450        460        470        480 
SVERVRNGST LVGQAGTTMG EILQAVARVT DIMGEIAAAS EEQASGITQV GRAVTQMDQV 

       490        500        510        520 
TQQNAALVEE AAAAAASLQE QAGRLRGAIG AFRVGDAGGL R 

« Hide

References

[1]"Complete sequence of chromosome 1 of Burkholderia cepacia AMMD."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Pitluck S., Bruce D., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L. expand/collapse author list , Kyrpides N., Kim E., Parke J., Coenye T., Konstantinidis K., Ramette A., Tiedje J., Richardson P.
Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC BAA-244 / AMMD.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000440 Genomic DNA. Translation: ABI88447.1.
RefSeqYP_774781.1. NC_008390.1.

3D structure databases

ProteinModelPortalQ0BBM6.
SMRQ0BBM6. Positions 291-514.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING339670.Bamb_2891.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABI88447; ABI88447; Bamb_2891.
GeneID4310740.
KEGGbam:Bamb_2891.
PATRIC19021530. VBIBurAmb61564_3026.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0840.
HOGENOMHOG000148074.
KOK03406.
OMAHRTEDTA.
OrthoDBEOG6G4VQG.
ProtClustDBCLSK930320.

Enzyme and pathway databases

BioCycBAMB339670:GH48-2960-MONOMER.

Family and domain databases

InterProIPR004010. Cache_domain.
IPR004090. Chemotax_Me-accpt_rcpt.
IPR004091. Chemotax_Me-accpt_rcpt_Me-site.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamPF08269. Cache_2. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
PRINTSPR00260. CHEMTRNSDUCR.
SMARTSM01049. Cache_2. 1 hit.
SM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEPS00538. CHEMOTAXIS_TRANSDUC_1. 1 hit.
PS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ0BBM6_BURCM
AccessionPrimary (citable) accession number: Q0BBM6
Entry history
Integrated into UniProtKB/TrEMBL: October 17, 2006
Last sequence update: October 17, 2006
Last modified: February 19, 2014
This is version 45 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)