Q0BBD0 (Q0BBD0_BURCM) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Glycoside hydrolase, family 1 EMBL ABI88543.1

Gene names

Ordered Locus Names:

Bamb_2987

Organism

Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) (Burkholderia cepacia (strain AMMD)) [Complete proteome] [HAMAP]

Taxonomic identifier

339670 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Burkholderiaceae › Burkholderia › Burkholderia cepacia complex

Protein attributes

Sequence length	472 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Predicted

Ontologies

Keywords
Domain	Signal EMBL ABI88543.1
Molecular function	Hydrolase EMBL ABI88543.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	cation binding Inferred from electronic annotation. Source: InterPro hydrolase activity, hydrolyzing O-glycosyl compounds Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 29	29	Potential EMBL ABI88543.1
	Chain	30 – 472	443	Potential EMBL ABI88543.1		PRO_5000127684

Sequences

	Sequence		Length	Mass (Da)
	Q0BBD0 [UniParc]. Last modified October 17, 2006. Version 1. Checksum: 79409FB46D9F0E4F	FASTA	472	51,067
	10 20 30 40 50 60 MIKPISLQSR RRFLAQGTAM LGSGMLSACG GDSIDSDASA RFADDFVWGV ATAAPQIESR 70 80 90 100 110 120 DGRGRSNWDV FADQPGTIAD GSTNARCIEF EKRYPGDLSL LANAGVQGFR FSTAWPRVQP 130 140 150 160 170 180 DGPGAASEAG LATYDRMVDA MLERHLTPYL TLFHWDIPVW AGDFRDRDIA YRLADYAQQV 190 200 210 220 230 240 SRRLGDRVKH WMMLNEPNGV ALSGYAYGAS PPRAQSMGAM FAAIHHQNLA QGLMFQAVRS 250 260 270 280 290 300 NVRGAAQVGT TISGRPVHAA TNAAADQAAA AQFDAIWHRA FLDPLYGKGY PAELQAALAP 310 320 330 340 350 360 LVQPGDMATI AANPDFLGVQ YYNCFYVKAG ANGTGFALAA SPANETQTLG YPVEPYGMSE 370 380 390 400 410 420 MLLRVHRDYG APRIVVTETG FAIAEPAPSG GIVDDGPRID YLASYLNAAH NAYRQGVRLG 430 440 450 460 470 GVFYWAGMDS WEWSSGFAKK FGLIHVDPAT QQRVPKRSLA YYSRCIAGNR VA

References

[1]

"Complete sequence of chromosome 1 of Burkholderia cepacia AMMD." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Pitluck S., Bruce D., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L. , Kyrpides N., Kim E., Parke J., Coenye T., Konstantinidis K., Ramette A., Tiedje J., Richardson P. Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000440 Genomic DNA. Translation: ABI88543.1.
RefSeq	YP_774877.1. NC_008390.1.
3D structure databases
ProteinModelPortal	Q0BBD0.
ModBase	Search...
Protein-protein interaction databases
STRING	Q0BBD0.
Protein family/group databases
CAZy	GH1. Glycoside Hydrolase Family 1.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4310574.
GenomeReviews	Gene locus Bamb_2987 in contig CP000440_GR.
KEGG	bam:Bamb_2987.
NMPDR	fig|339670.3.peg.177.
PATRIC	19021738. VBIBurAmb61564_3130.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG2723.
HOGENOM	HBG316462.
OMA	LRISIDW.
ProtClustDB	CLSK954814.
Family and domain databases
InterPro	IPR001360. Glyco_hydro_1. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. IPR006311. TAT_signal. [Graphical view]
Gene3D	G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
PANTHER	PTHR10353. Glyco_hydro_1. 1 hit.
Pfam	PF00232. Glyco_hydro_1. 1 hit. [Graphical view]
PRINTS	PR00131. GLHYDRLASE1.
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit.
PROSITE	PS51318. TAT. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q0BBD0_BURCM

Accession

Primary (citable) accession number: Q0BBD0

Entry history

Integrated into UniProtKB/TrEMBL:	October 17, 2006
Last sequence update:	October 17, 2006
Last modified:	December 14, 2011
This is version 33 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)