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Protein
Submitted name:

2-methylcitrate dehydratase

Gene

Bamb_3306

Organism
Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) (Burkholderia cepacia (strain AMMD))
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. 2 iron, 2 sulfur cluster binding Source: InterPro
  2. 2-methylcitrate dehydratase activity Source: UniProtKB-EC

GO - Biological processi

  1. propionate catabolic process, 2-methylcitrate cycle Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LyaseImported

Enzyme and pathway databases

BioCyciBAMB339670:GH48-3376-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
2-methylcitrate dehydrataseImported (EC:4.2.1.79Imported)
Gene namesi
Ordered Locus Names:Bamb_3306Imported
OrganismiBurkholderia ambifaria (strain ATCC BAA-244 / AMMD) (Burkholderia cepacia (strain AMMD))Imported
Taxonomic identifieri339670 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderiaBurkholderia cepacia complex
ProteomesiUP000000662: Chromosome 2

Interactioni

Protein-protein interaction databases

STRINGi339670.Bamb_3306.

Structurei

3D structure databases

ProteinModelPortaliQ0BAG2.
SMRiQ0BAG2. Positions 13-483.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG2079.
HOGENOMiHOG000159916.
KOiK01720.
OMAiCLMDTLG.
OrthoDBiEOG6RC3K5.

Family and domain databases

InterProiIPR012705. 2Me_IsoCit_deHydtase_PrpD.
IPR005656. MmgE_PrpD.
[Graphical view]
PANTHERiPTHR16943. PTHR16943. 1 hit.
PfamiPF03972. MmgE_PrpD. 1 hit.
[Graphical view]
SUPFAMiSSF103378. SSF103378. 1 hit.
TIGRFAMsiTIGR02330. prpD. 1 hit.

Sequencei

Sequence statusi: Complete.

Q0BAG2-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MSAPVSNVRP APDTVLVDIV DYVLNTGIDS ALALETARHC LIDTLGCGLE
60 70 80 90 100
ALSYPACTKL LGPVVPGTIV PNGAKVPGTS FQLDPVQAAF DIGAMIRWLD
110 120 130 140 150
FNDTWLAAEW GHPSDNLGGI LATADWLSRT AVAAGRQPLA MRDVLVAMIQ
160 170 180 190 200
AHEIQGCLAL ENSFNAVGLD HVLLVKVAST AVVGRLLGLT RDELINAVSN
210 220 230 240 250
AFVDGQALRT YRHAPNTGSR KSWAAGDATS RAVRLALIAK TGEMGYPSAL
260 270 280 290 300
TAKTWGFYDV LFDGQPFRFQ RPYGTYVMEN VLFKIAFPAE FHAQTAAEAA
310 320 330 340 350
LQLHAQLAAA GRTTDDISRI TIRTHAAALR IIDKQGPLAN PADRDHCIQY
360 370 380 390 400
MVAVPLLFGR LTAADYEDAV AADPRIDALR AKTVCVEDPQ FTKDYHDPAR
410 420 430 440 450
RSIANALTIE FADGSKLAEV AIEYPLGHRR RRAEGIPLLV EKFRTNLARR
460 470 480
FPARQQQAIL DVSLDQATLE AMPVDEYVDL YVI
Length:483
Mass (Da):52,420
Last modified:October 17, 2006 - v1
Checksum:i66DA585EFDA3FE3E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000441 Genomic DNA. Translation: ABI88861.1.
RefSeqiWP_011658347.1. NC_008391.1.
YP_775195.1. NC_008391.1.

Genome annotation databases

EnsemblBacteriaiABI88861; ABI88861; Bamb_3306.
GeneIDi4312308.
KEGGibam:Bamb_3306.
PATRICi19022405. VBIBurAmb61564_3460.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000441 Genomic DNA. Translation: ABI88861.1.
RefSeqiWP_011658347.1. NC_008391.1.
YP_775195.1. NC_008391.1.

3D structure databases

ProteinModelPortaliQ0BAG2.
SMRiQ0BAG2. Positions 13-483.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi339670.Bamb_3306.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABI88861; ABI88861; Bamb_3306.
GeneIDi4312308.
KEGGibam:Bamb_3306.
PATRICi19022405. VBIBurAmb61564_3460.

Phylogenomic databases

eggNOGiCOG2079.
HOGENOMiHOG000159916.
KOiK01720.
OMAiCLMDTLG.
OrthoDBiEOG6RC3K5.

Enzyme and pathway databases

BioCyciBAMB339670:GH48-3376-MONOMER.

Family and domain databases

InterProiIPR012705. 2Me_IsoCit_deHydtase_PrpD.
IPR005656. MmgE_PrpD.
[Graphical view]
PANTHERiPTHR16943. PTHR16943. 1 hit.
PfamiPF03972. MmgE_PrpD. 1 hit.
[Graphical view]
SUPFAMiSSF103378. SSF103378. 1 hit.
TIGRFAMsiTIGR02330. prpD. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of chromosome 2 of Burkholderia cepacia AMMD."
    Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Pitluck S., Bruce D., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L.
    , Kyrpides N., Kim E., Parke J., Coenye T., Konstantinidis K., Ramette A., Tiedje J., Richardson P.
    Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC BAA-244 / AMMDImported.

Entry informationi

Entry nameiQ0BAG2_BURCM
AccessioniPrimary (citable) accession number: Q0BAG2
Entry historyi
Integrated into UniProtKB/TrEMBL: October 17, 2006
Last sequence update: October 17, 2006
Last modified: January 7, 2015
This is version 45 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.