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Protein
Submitted name:

2,3-dimethylmalate lyase

Gene

Bamb_3535

Organism
Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) (Burkholderia cepacia (strain AMMD))
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. 2,3-dimethylmalate lyase activity Source: UniProtKB-EC
  2. phosphoenolpyruvate mutase activity Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LyaseImported

Enzyme and pathway databases

BioCyciBAMB339670:GH48-3606-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
2,3-dimethylmalate lyaseImported (EC:4.1.3.32Imported)
Gene namesi
Ordered Locus Names:Bamb_3535Imported
OrganismiBurkholderia ambifaria (strain ATCC BAA-244 / AMMD) (Burkholderia cepacia (strain AMMD))Imported
Taxonomic identifieri339670 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderiaBurkholderia cepacia complex
ProteomesiUP000000662: Chromosome 2

Interactioni

Protein-protein interaction databases

STRINGi339670.Bamb_3535.

Structurei

3D structure databases

ProteinModelPortaliQ0B9T4.
SMRiQ0B9T4. Positions 12-297.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG2513.
HOGENOMiHOG000171929.
KOiK01841.
OMAiDFAWCSA.
OrthoDBiEOG6N947Q.

Family and domain databases

Gene3Di3.20.20.60. 1 hit.
3.90.550.10. 1 hit.
InterProiIPR025877. MobA-like_NTP_Trfase_dom.
IPR029044. Nucleotide-diphossugar_trans.
IPR012698. PEnolPyrv_PMutase_core.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamiPF12804. NTP_transf_3. 1 hit.
[Graphical view]
SUPFAMiSSF51621. SSF51621. 1 hit.
SSF53448. SSF53448. 1 hit.
TIGRFAMsiTIGR02320. PEP_mutase. 1 hit.

Sequencei

Sequence statusi: Complete.

Q0B9T4-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MNAREPNFSE SRSARLRRML VSNELEFLME AHNGLSARIV REAGFKGIWA
60 70 80 90 100
SGLAISAQFG VRDNNEASWT QVVDVLEFMA DASDLPILLD GDTGYGNFNN
110 120 130 140 150
VRRLVKKLEQ RGIAGVCIED KQFPKTNSFI GGERQPLAEI DEFCGKIKAG
160 170 180 190 200
KDSQSDSDFS IVARVEALIA GWGMDEALRR ANAYAEAGAD AILIHSKLSR
210 220 230 240 250
PDEILQFARE WSGKAPLVIV PTKYYSTPTD VFRQAGISTV IWANHLIRAS
260 270 280 290 300
ASAMQAVARE IHENETLINV EDRVASVNEI FRLQDADEYS AAERIYLSSS
310 320 330 340 350
SRASNAAIVL AASRGKGLEA VTEDKPKVML PVAGKPLLRW LVDGFKTHGV
360 370 380 390 400
NDITVVGGYR ADAIDTSGIK LVVNERHAQT GELASLACAA ERLTGDTVIS
410 420 430 440 450
YGDLLFRSYI VRDLAESEAE FSVVVDSSLT ETNQSVRDFA LCSAADDRGL
460 470 480 490 500
FGQKTYLQRV SSDVAAGTPH GRWIGLLNVR GAGVDRLKAM LATLQARPDF
510 520 530 540 550
DTLDIPSLLN ELIAAGEKIE VQYVHGHWRG VNDLEDFRRA GDFAHGQTPL
560
SEPSTGNGGA Q
Length:561
Mass (Da):61,130
Last modified:October 17, 2006 - v1
Checksum:i8A9FD8468788C57E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000441 Genomic DNA. Translation: ABI89089.1.
RefSeqiYP_775423.1. NC_008391.1.

Genome annotation databases

EnsemblBacteriaiABI89089; ABI89089; Bamb_3535.
GeneIDi4312431.
KEGGibam:Bamb_3535.
PATRICi19022863. VBIBurAmb61564_3688.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000441 Genomic DNA. Translation: ABI89089.1.
RefSeqiYP_775423.1. NC_008391.1.

3D structure databases

ProteinModelPortaliQ0B9T4.
SMRiQ0B9T4. Positions 12-297.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi339670.Bamb_3535.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABI89089; ABI89089; Bamb_3535.
GeneIDi4312431.
KEGGibam:Bamb_3535.
PATRICi19022863. VBIBurAmb61564_3688.

Phylogenomic databases

eggNOGiCOG2513.
HOGENOMiHOG000171929.
KOiK01841.
OMAiDFAWCSA.
OrthoDBiEOG6N947Q.

Enzyme and pathway databases

BioCyciBAMB339670:GH48-3606-MONOMER.

Family and domain databases

Gene3Di3.20.20.60. 1 hit.
3.90.550.10. 1 hit.
InterProiIPR025877. MobA-like_NTP_Trfase_dom.
IPR029044. Nucleotide-diphossugar_trans.
IPR012698. PEnolPyrv_PMutase_core.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamiPF12804. NTP_transf_3. 1 hit.
[Graphical view]
SUPFAMiSSF51621. SSF51621. 1 hit.
SSF53448. SSF53448. 1 hit.
TIGRFAMsiTIGR02320. PEP_mutase. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of chromosome 2 of Burkholderia cepacia AMMD."
    Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Pitluck S., Bruce D., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L.
    , Kyrpides N., Kim E., Parke J., Coenye T., Konstantinidis K., Ramette A., Tiedje J., Richardson P.
    Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC BAA-244 / AMMDImported.

Entry informationi

Entry nameiQ0B9T4_BURCM
AccessioniPrimary (citable) accession number: Q0B9T4
Entry historyi
Integrated into UniProtKB/TrEMBL: October 17, 2006
Last sequence update: October 17, 2006
Last modified: February 4, 2015
This is version 49 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.