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Protein
Submitted name:

Methyl-accepting chemotaxis sensory transducer

Gene

Bamb_3790

Organism
Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) (Burkholderia cepacia (strain AMMD))
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. signal transducer activity Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciBAMB339670:GH48-3861-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Methyl-accepting chemotaxis sensory transducerImported
Gene namesi
Ordered Locus Names:Bamb_3790Imported
OrganismiBurkholderia ambifaria (strain ATCC BAA-244 / AMMD) (Burkholderia cepacia (strain AMMD))Imported
Taxonomic identifieri339670 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderiaBurkholderia cepacia complex
ProteomesiUP000000662: Chromosome 2

Subcellular locationi

GO - Cellular componenti

  1. integral component of membrane Source: InterPro
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2424 PotentialImportedAdd
BLAST
Chaini25 – 599575 PotentialImportedPRO_5000127842Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi339670.Bamb_3790.

Structurei

3D structure databases

ProteinModelPortaliQ0B929.
SMRiQ0B929. Positions 375-598.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

SignalImported

Phylogenomic databases

eggNOGiCOG0840.
HOGENOMiHOG000148074.
KOiK03406.
OMAiFGMLIDS.
OrthoDBiEOG6G4VQG.

Family and domain databases

InterProiIPR004010. Cache_domain.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
IPR029151. Sensor-like.
[Graphical view]
PfamiPF02743. Cache_1. 1 hit.
PF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
SMARTiSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
SUPFAMiSSF103190. SSF103190. 1 hit.
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q0B929-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MFSSIRTRIL AACVAIVVFA LVATTLINYF IARSYNEDAI DRNLTSVASG
60 70 80 90 100
HVVGIGDWVA TRSRMIASLQ DAALSPDPLP AFKQMAAAGG FTNVYAGYAD
110 120 130 140 150
KVFHFSDPTG IPPDYDPTGR PWYKQAAQAG KPVVTPPYVD AGTGNLVVTF
160 170 180 190 200
AVPILRDGAL KGVVAADVAM DSVIANVKSI HPTPASFGML IDSNGHVVAH
210 220 230 240 250
PDAKLTLKPV ADVSPDLGGM SAASLAAATA PVEVHVGGDA KLARAQAVPG
260 270 280 290 300
TDWYALVLLD KSEATAGMRS LLTASLVTLV VIVGVASLII GAITTTAFRR
310 320 330 340 350
LSQVRQAMAS IGSGTGDLTQ RLPAEGRDEV ADIARSFNSF VDKLNDVMRQ
360 370 380 390 400
IRDASESVRT AANEIAAGNQ DLSSRTESAA ASLEETAASM EEITATVGQS
410 420 430 440 450
AAAAGQADER AAAASRIASH GGVVVSDVVA TMGKIEEASG RIGDIIGVID
460 470 480 490 500
GIAFQTNILA LNAAVEAARA GEQGRGFAVV AQEVRSLAQR SAQAAREVKV
510 520 530 540 550
LVESTVASVS AGSGQVRQAG DTMREIVSNV ANVTTIISEI THAANEQTRG
560 570 580 590
IQEVNRAVTQ LDEMVQQNAA LVEQSTAAAT ALQTQANALA TTVGQFKVA
Length:599
Mass (Da):61,869
Last modified:October 17, 2006 - v1
Checksum:i8DEDFC82D75634CC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000441 Genomic DNA. Translation: ABI89344.1.
RefSeqiYP_775678.1. NC_008391.1.

Genome annotation databases

EnsemblBacteriaiABI89344; ABI89344; Bamb_3790.
GeneIDi4312686.
KEGGibam:Bamb_3790.
PATRICi19023399. VBIBurAmb61564_3956.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000441 Genomic DNA. Translation: ABI89344.1.
RefSeqiYP_775678.1. NC_008391.1.

3D structure databases

ProteinModelPortaliQ0B929.
SMRiQ0B929. Positions 375-598.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi339670.Bamb_3790.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABI89344; ABI89344; Bamb_3790.
GeneIDi4312686.
KEGGibam:Bamb_3790.
PATRICi19023399. VBIBurAmb61564_3956.

Phylogenomic databases

eggNOGiCOG0840.
HOGENOMiHOG000148074.
KOiK03406.
OMAiFGMLIDS.
OrthoDBiEOG6G4VQG.

Enzyme and pathway databases

BioCyciBAMB339670:GH48-3861-MONOMER.

Family and domain databases

InterProiIPR004010. Cache_domain.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
IPR029151. Sensor-like.
[Graphical view]
PfamiPF02743. Cache_1. 1 hit.
PF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
SMARTiSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
SUPFAMiSSF103190. SSF103190. 1 hit.
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of chromosome 2 of Burkholderia cepacia AMMD."
    Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Pitluck S., Bruce D., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L.
    , Kyrpides N., Kim E., Parke J., Coenye T., Konstantinidis K., Ramette A., Tiedje J., Richardson P.
    Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC BAA-244 / AMMDImported.

Entry informationi

Entry nameiQ0B929_BURCM
AccessioniPrimary (citable) accession number: Q0B929
Entry historyi
Integrated into UniProtKB/TrEMBL: October 17, 2006
Last sequence update: October 17, 2006
Last modified: February 4, 2015
This is version 49 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.