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Q0B8B5 (Q0B8B5_BURCM) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 42. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length519 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Ontologies

Keywords
   DomainSignal EMBL ABI89608.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processchemotaxis

Inferred from electronic annotation. Source: InterPro

   Cellular_componentintegral component of membrane

Inferred from electronic annotation. Source: InterPro

   Molecular_functiontransmembrane signaling receptor activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 4545 Potential EMBL ABI89608.1
Chain46 – 519474 Potential EMBL ABI89608.1
PRO_5000127911

Sequences

Sequence LengthMass (Da)Tools
Q0B8B5 [UniParc].

Last modified October 17, 2006. Version 1.
Checksum: B48E47407F49E718

FASTA51954,749
        10         20         30         40         50         60 
MNLNALFSRF SIRTRIFSTL GLVAVLLVVS GLIGLTGMQS SNRALDEAYT RQLAAKTALS 

        70         80         90        100        110        120 
AASLNLTIVR TTLDRALLHP EAPDVPDLVK KADSYLAKAD AAWRTYAGMP HDGDEGPLAT 

       130        140        150        160        170        180 
RLDAARQALI GQALKPLMDA IRDGRRDDAD RLLMTVAPPL SVALTQATDA LDAYQAARGK 

       190        200        210        220        230        240 
EVYDTAQTYY GWMRAGALAG IAFGLAACFG CAVGLHFAIT QPVNRLLSHF RRLSEGDLTS 

       250        260        270        280        290        300 
EVRWSSRDEM AELVKGVTGM QRSLADTVRQ VSQGSEAIST ATHQIAAGNT DLSQRTEEQA 

       310        320        330        340        350        360 
SALQETAASM EQLTATVKQN ADHAVEAQAC ADTASEIATR GATVVGEVIG TMNEIDQSSQ 

       370        380        390        400        410        420 
KVADIIGTIE GIAFQTNILA LNAAVEAARA GEQGRGFAVV AGEVRTLAQR SASAAKEIRT 

       430        440        450        460        470        480 
LIGESVERVA TGSRLVGVAG ATMQDIQQAI GRVTGIMTEI AAASNEQRDG IEQVNRAVSQ 

       490        500        510 
MDQVSQQNAA LVEQAAAAAA SLEEQADGLR RAVGAFRVA 

« Hide

References

[1]"Complete sequence of chromosome 2 of Burkholderia cepacia AMMD."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Pitluck S., Bruce D., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L. expand/collapse author list , Kyrpides N., Kim E., Parke J., Coenye T., Konstantinidis K., Ramette A., Tiedje J., Richardson P.
Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC BAA-244 / AMMD.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000441 Genomic DNA. Translation: ABI89608.1.
RefSeqYP_775942.1. NC_008391.1.

3D structure databases

ProteinModelPortalQ0B8B5.
SMRQ0B8B5. Positions 295-518.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING339670.Bamb_4055.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABI89608; ABI89608; Bamb_4055.
GeneID4312950.
KEGGbam:Bamb_4055.
PATRIC19023971. VBIBurAmb61564_4242.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0840.
HOGENOMHOG000148074.
KOK03406.
OMAWRTYAGM.
OrthoDBEOG6G4VQG.
ProtClustDBCLSK929979.

Enzyme and pathway databases

BioCycBAMB339670:GH48-4126-MONOMER.

Family and domain databases

InterProIPR004090. Chemotax_Me-accpt_rcpt.
IPR003122. Chemotax_Me-accpt_rcpt_lig-bd.
IPR004091. Chemotax_Me-accpt_rcpt_Me-site.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamPF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
PF02203. TarH. 1 hit.
[Graphical view]
PRINTSPR00260. CHEMTRNSDUCR.
SMARTSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
SUPFAMSSF47170. SSF47170. 1 hit.
PROSITEPS00538. CHEMOTAXIS_TRANSDUC_1. 1 hit.
PS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ0B8B5_BURCM
AccessionPrimary (citable) accession number: Q0B8B5
Entry history
Integrated into UniProtKB/TrEMBL: October 17, 2006
Last sequence update: October 17, 2006
Last modified: April 16, 2014
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)