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Protein
Submitted name:

Methyl-accepting chemotaxis sensory transducer

Gene

Bamb_4055

Organism
Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) (Burkholderia cepacia (strain AMMD))
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionTransducerPROSITE-ProRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Methyl-accepting chemotaxis sensory transducerImported
Gene namesi
Ordered Locus Names:Bamb_4055Imported
OrganismiBurkholderia ambifaria (strain ATCC BAA-244 / AMMD) (Burkholderia cepacia (strain AMMD))Imported
Taxonomic identifieri339670 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderiaBurkholderia cepacia complex
Proteomesi
  • UP000000662 Componenti: Chromosome 2

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei16 – 35HelicalSequence analysisAdd BLAST20
Transmembranei197 – 219HelicalSequence analysisAdd BLAST23

GO - Cellular componenti

Keywords - Cellular componenti

Membrane

Interactioni

Protein-protein interaction databases

STRINGi339670.Bamb_4055.

Structurei

3D structure databases

ProteinModelPortaliQ0B8B5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini217 – 269HAMPInterPro annotationAdd BLAST53
Domaini274 – 503Methyl-accepting transducerInterPro annotationAdd BLAST230

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili474 – 512Sequence analysisAdd BLAST39

Keywords - Domaini

Coiled coilSequence analysis, Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG4105C8Q. Bacteria.
COG0840. LUCA.
HOGENOMiHOG000148074.
KOiK03406.
OMAiVEAQACA.
OrthoDBiPOG091H0QRR.

Family and domain databases

CDDicd06225. HAMP. 1 hit.
cd00181. Tar_Tsr_LBD. 1 hit.
Gene3Di1.20.120.30. 1 hit.
InterProiView protein in InterPro
IPR004090. Chemotax_Me-accpt_rcpt.
IPR004091. Chemotax_Me-accpt_rcpt_Me-site.
IPR035440. Four_Helix_Bundle_domain.
IPR003660. HAMP_dom.
IPR004089. MCPsignal_dom.
IPR003122. Tar_rcpt_lig-bd.
PfamiView protein in Pfam
PF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
PF02203. TarH. 1 hit.
PRINTSiPR00260. CHEMTRNSDUCR.
SMARTiView protein in SMART
SM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
SUPFAMiSSF47170. SSF47170. 1 hit.
PROSITEiView protein in PROSITE
PS00538. CHEMOTAXIS_TRANSDUC_1. 1 hit.
PS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.

Sequencei

Sequence statusi: Complete.

Q0B8B5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNLNALFSRF SIRTRIFSTL GLVAVLLVVS GLIGLTGMQS SNRALDEAYT
60 70 80 90 100
RQLAAKTALS AASLNLTIVR TTLDRALLHP EAPDVPDLVK KADSYLAKAD
110 120 130 140 150
AAWRTYAGMP HDGDEGPLAT RLDAARQALI GQALKPLMDA IRDGRRDDAD
160 170 180 190 200
RLLMTVAPPL SVALTQATDA LDAYQAARGK EVYDTAQTYY GWMRAGALAG
210 220 230 240 250
IAFGLAACFG CAVGLHFAIT QPVNRLLSHF RRLSEGDLTS EVRWSSRDEM
260 270 280 290 300
AELVKGVTGM QRSLADTVRQ VSQGSEAIST ATHQIAAGNT DLSQRTEEQA
310 320 330 340 350
SALQETAASM EQLTATVKQN ADHAVEAQAC ADTASEIATR GATVVGEVIG
360 370 380 390 400
TMNEIDQSSQ KVADIIGTIE GIAFQTNILA LNAAVEAARA GEQGRGFAVV
410 420 430 440 450
AGEVRTLAQR SASAAKEIRT LIGESVERVA TGSRLVGVAG ATMQDIQQAI
460 470 480 490 500
GRVTGIMTEI AAASNEQRDG IEQVNRAVSQ MDQVSQQNAA LVEQAAAAAA
510
SLEEQADGLR RAVGAFRVA
Length:519
Mass (Da):54,749
Last modified:October 17, 2006 - v1
Checksum:iB48E47407F49E718
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000441 Genomic DNA. Translation: ABI89608.1.
RefSeqiWP_011659052.1. NZ_CP009799.1.

Genome annotation databases

EnsemblBacteriaiABI89608; ABI89608; Bamb_4055.
KEGGibam:Bamb_4055.
PATRICifig|339670.21.peg.4342.

Similar proteinsi

Entry informationi

Entry nameiQ0B8B5_BURCM
AccessioniPrimary (citable) accession number: Q0B8B5
Entry historyiIntegrated into UniProtKB/TrEMBL: October 17, 2006
Last sequence update: October 17, 2006
Last modified: August 30, 2017
This is version 63 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported