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Q0B7R9 (Q0B7R9_BURCM) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 32. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Cystathionine beta-lyase EMBL ABI89804.1
EC=4.4.1.8 EMBL ABI89804.1
Gene names
Ordered Locus Names:Bamb_4251
OrganismBurkholderia ambifaria (strain ATCC BAA-244 / AMMD) (Burkholderia cepacia (strain AMMD)) [Complete proteome] [HAMAP] EMBL ABI89804.1
Taxonomic identifier339670 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Burkholderiaceae › Burkholderia › Burkholderia cepacia complex

Protein attributes

Sequence length395 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLyase EMBL ABI89804.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processcellular amino acid metabolic process

Inferred from electronic annotation. Source: InterPro

   Cellular componentcytoplasm

Inferred from electronic annotation. Source: InterPro

   Molecular functioncystathionine beta-lyase activity

Inferred from electronic annotation. Source: EC

pyridoxal phosphate binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q0B7R9 [UniParc].

Last modified October 17, 2006. Version 1.
Checksum: 9A2A6EFBFF223DC5

FASTA39542,398
        10         20         30         40         50         60 
MNPLHSPDTL LAHEGRSHGQ PGSPVNPPVY RQSTLLFHGT GALDAVRGTP LAYGRHGSPT 

        70         80         90        100        110        120 
TRALEKALAR LEGAHAALLT PSGLSAITTA LLAVLNPGDH LLMADSVYDP TRSFCDETLA 

       130        140        150        160        170        180 
RLGIETTYYD PSIGAGIAAL MRPNTRAVFT ESPGSLTFEV QDIPAICRVA HQHGAVVLLD 

       190        200        210        220        230        240 
NTWGTPLNFR SFSHGVDVSI HAATKYIAGH SDVLMGVILT TEALAQQVTR CYRQLGMTVS 

       250        260        270        280        290        300 
GDDAYLALRG LRTLSVRLER HQRNAQVLTD WLARQPEVAQ ILYPARPGDA GHALWQRDFT 

       310        320        330        340        350        360 
GACGLFGLVL HPQPDEAVRA LLDGMTCFGM GYSWGGFESL IIPSNPSRQR TATQWNAAGP 

       370        380        390 
LLRIHAGLEH PDDMIADLDA GFARMRAAAA ALAES

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References

[1]"Complete sequence of chromosome 2 of Burkholderia cepacia AMMD."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Pitluck S., Bruce D., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L. expand/collapse author list , Kyrpides N., Kim E., Parke J., Coenye T., Konstantinidis K., Ramette A., Tiedje J., Richardson P.
Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000441 Genomic DNA. Translation: ABI89804.1.
RefSeqYP_776138.1. NC_008391.1.

3D structure databases

ProteinModelPortalQ0B7R9.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ0B7R9.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4313146.
GenomeReviewsGene locus Bamb_4251 in contig CP000441_GR.
KEGGbam:Bamb_4251.
NMPDRfig|339670.3.peg.4999.
PATRIC19024389. VBIBurAmb61564_4451.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0626.
HOGENOMHBG754729.
OMADDNTWAT.
PhylomeDBQ0B7R9.
ProtClustDBCLSK769977.

Family and domain databases

InterProIPR000277. Cys/Met-Metab_PyrdxlP-dep_enz.
IPR006233. Cys_b_lyase_bac.
IPR015424. PyrdxlP-dep_Trfase_major_dom.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
Gene3DG3DSA:3.40.640.10. PyrdxlP-dep_Trfase_major_sub1. 1 hit.
G3DSA:3.90.1150.10. PyrdxlP-dep_Trfase_major_sub2. 1 hit.
KOK01760.
PANTHERPTHR11808:SF8. Cys_b_lyase_bac. 1 hit.
PTHR11808. Cys_Met_Meta_PP. 1 hit.
PfamPF01053. Cys_Met_Meta_PP. 1 hit.
[Graphical view]
PIRSFPIRSF001434. CGS. 1 hit.
SUPFAMSSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
TIGRFAMsTIGR01324. Cysta_beta_ly_B. 1 hit.
PROSITEPS00868. CYS_MET_METAB_PP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ0B7R9_BURCM
AccessionPrimary (citable) accession number: Q0B7R9
Entry history
Integrated into UniProtKB/TrEMBL: October 17, 2006
Last sequence update: October 17, 2006
Last modified: January 25, 2012
This is version 32 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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