Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor

Gene

Bamb_4714

Organism
Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) (Burkholderia cepacia (strain AMMD))
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Enzyme and pathway databases

BioCyciBAMB339670:GH48-4791-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Methyl-accepting chemotaxis sensory transducer with Pas/Pac sensorImported
Gene namesi
Ordered Locus Names:Bamb_4714Imported
OrganismiBurkholderia ambifaria (strain ATCC BAA-244 / AMMD) (Burkholderia cepacia (strain AMMD))Imported
Taxonomic identifieri339670 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderiaBurkholderia cepacia complex
ProteomesiUP000000662 Componenti: Chromosome 2

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi339670.Bamb_4714.

Structurei

3D structure databases

ProteinModelPortaliQ0B6F9.
SMRiQ0B6F9. Positions 313-535.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG2202.
HOGENOMiHOG000148074.
KOiK03776.
OMAiISNATHE.
OrthoDBiEOG6G4VQG.

Family and domain databases

InterProiIPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
IPR001610. PAC.
IPR000014. PAS.
IPR013655. PAS_fold_3.
[Graphical view]
PfamiPF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
PF08447. PAS_3. 1 hit.
[Graphical view]
SMARTiSM00283. MA. 1 hit.
SM00086. PAC. 1 hit.
SM00091. PAS. 1 hit.
[Graphical view]
SUPFAMiSSF55785. SSF55785. 1 hit.
TIGRFAMsiTIGR00229. sensory_box. 1 hit.
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50112. PAS. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q0B6F9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRTVSIPSTS GRKIRNPELH TMRNNQPVTQ REFEFPDDAT LMSTTDADSY
60 70 80 90 100
IKYANAAFIQ VSGFSPEEIE GQPHNVVRHP DMPKEAFADM WATLKNGEPW
110 120 130 140 150
TALVKNRRKN GDHYWVRSNT VPVMRNGQPT GYMSVRTKAS RDEIAAADAL
160 170 180 190 200
YRAFREGKAG NRRFHKGLIV RTGLMRVASL FQTMSVRARL HSTLCVLAPA
210 220 230 240 250
VVGAGWACGL TGGGLAVFAA ATAGVSVAAG LWLDAQIARP LMQLRDQALR
260 270 280 290 300
VATGESRTGV AMNRVDEIGM TLRTINQLGL MFRWLVDDVS EQVHNVQRAS
310 320 330 340 350
NEIAQGNNDL SARTEQASTS VQQTAASMAE MTATVSSNAE TALQANQLSV
360 370 380 390 400
SASDAAERGG QAVSEVVATM NDITASSRKI SDIIGVIDGI AFQTNILALN
410 420 430 440 450
AAVEAARAGD QGRGFAVVAG EVRALAQRSA NAAKEIKTLI GASVDRVESG
460 470 480 490 500
ARIVDGAGKT MEDIVTQVKR VSDLIAEISS STAEQSTGVA QVDQAVVHLD
510 520 530
NITQQNAALV EQSTAASESL KQQATRLVDA VNVFR
Length:535
Mass (Da):57,292
Last modified:October 17, 2006 - v1
Checksum:iF11F7B9700D91C84
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000441 Genomic DNA. Translation: ABI90264.1.

Genome annotation databases

EnsemblBacteriaiABI90264; ABI90264; Bamb_4714.
KEGGibam:Bamb_4714.
PATRICi19025385. VBIBurAmb61564_4943.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000441 Genomic DNA. Translation: ABI90264.1.

3D structure databases

ProteinModelPortaliQ0B6F9.
SMRiQ0B6F9. Positions 313-535.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi339670.Bamb_4714.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABI90264; ABI90264; Bamb_4714.
KEGGibam:Bamb_4714.
PATRICi19025385. VBIBurAmb61564_4943.

Phylogenomic databases

eggNOGiCOG2202.
HOGENOMiHOG000148074.
KOiK03776.
OMAiISNATHE.
OrthoDBiEOG6G4VQG.

Enzyme and pathway databases

BioCyciBAMB339670:GH48-4791-MONOMER.

Family and domain databases

InterProiIPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
IPR001610. PAC.
IPR000014. PAS.
IPR013655. PAS_fold_3.
[Graphical view]
PfamiPF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
PF08447. PAS_3. 1 hit.
[Graphical view]
SMARTiSM00283. MA. 1 hit.
SM00086. PAC. 1 hit.
SM00091. PAS. 1 hit.
[Graphical view]
SUPFAMiSSF55785. SSF55785. 1 hit.
TIGRFAMsiTIGR00229. sensory_box. 1 hit.
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50112. PAS. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of chromosome 2 of Burkholderia cepacia AMMD."
    Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Pitluck S., Bruce D., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L.
    , Kyrpides N., Kim E., Parke J., Coenye T., Konstantinidis K., Ramette A., Tiedje J., Richardson P.
    Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC BAA-244 / AMMDImported.

Entry informationi

Entry nameiQ0B6F9_BURCM
AccessioniPrimary (citable) accession number: Q0B6F9
Entry historyi
Integrated into UniProtKB/TrEMBL: October 17, 2006
Last sequence update: October 17, 2006
Last modified: July 22, 2015
This is version 55 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.