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Protein
Submitted name:

Methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor

Gene

Bamb_4715

Organism
Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) (Burkholderia cepacia (strain AMMD))
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

BioCyciBAMB339670:GH48-4792-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Methyl-accepting chemotaxis sensory transducer with Pas/Pac sensorImported
Gene namesi
Ordered Locus Names:Bamb_4715Imported
OrganismiBurkholderia ambifaria (strain ATCC BAA-244 / AMMD) (Burkholderia cepacia (strain AMMD))Imported
Taxonomic identifieri339670 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderiaBurkholderia cepacia complex
ProteomesiUP000000662 Componenti: Chromosome 2

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi339670.Bamb_4715.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG2202.
HOGENOMiHOG000148074.
KOiK03776.
OMAiDISRQIT.
OrthoDBiEOG6G4VQG.

Family and domain databases

InterProiIPR004090. Chemotax_Me-accpt_rcpt.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
IPR001610. PAC.
IPR000014. PAS.
[Graphical view]
PfamiPF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
PF13426. PAS_9. 1 hit.
[Graphical view]
PRINTSiPR00260. CHEMTRNSDUCR.
SMARTiSM00283. MA. 1 hit.
SM00086. PAC. 1 hit.
[Graphical view]
SUPFAMiSSF55785. SSF55785. 1 hit.
TIGRFAMsiTIGR00229. sensory_box. 1 hit.
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50112. PAS. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q0B6F8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRNNQPVTQQ EFEFPDDVTL MSTTDADSII TYANTTFAHV SGFSTDELVG
60 70 80 90 100
QPHNVVRHPD MPKEAFADMW ATLKNGEPWT ALVKNRRKNG DHYWVRANAV
110 120 130 140 150
PVMRNGAPHG YMSVRTRAPR DEVAAADPLY RAFSEGKAGQ RRFHKGLIVR
160 170 180 190 200
TGLLRIASLP QTMSVRARVH AALCVLAPAV VGAGWACGLT GGGLAAFAAA
210 220 230 240 250
TAGVSVAAGL WLDAQIVRPL KQLHDQALNV ATGESRRGVR MNRVDEIGMT
260 270 280 290 300
LRTINQLGLM FRWLVDDVSE QVHNVQRASN EIAQGNNDLS ARTEQAASSV
310 320 330 340 350
QQTAASMAEM TATVDSNAET ALQANRFAVS ASDAAERGGQ AVSEVVATMN
360 370 380 390 400
DITASSRKIA DIIGVIDGIA FQTNILALNA AVEAARAGDQ GRGFAVVAGE
410 420 430 440 450
VRALAQRSAN AAKEIKTLIG ASVDRVESGA RRVDDAGRTM EDIVTQVKRV
460 470 480 490 500
SDLIAEISSS TAEQSTGVAQ VDQAVVHLDN ITQQNAALVE QSAAASESLK
510
QQATRLVDAV NVFR
Length:514
Mass (Da):54,856
Last modified:October 17, 2006 - v1
Checksum:i4960FD27C7AA9835
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000441 Genomic DNA. Translation: ABI90265.1.
RefSeqiWP_011659670.1. NC_008391.1.
YP_776599.1. NC_008391.1.

Genome annotation databases

EnsemblBacteriaiABI90265; ABI90265; Bamb_4715.
KEGGibam:Bamb_4715.
PATRICi19025389. VBIBurAmb61564_4945.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000441 Genomic DNA. Translation: ABI90265.1.
RefSeqiWP_011659670.1. NC_008391.1.
YP_776599.1. NC_008391.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi339670.Bamb_4715.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABI90265; ABI90265; Bamb_4715.
KEGGibam:Bamb_4715.
PATRICi19025389. VBIBurAmb61564_4945.

Phylogenomic databases

eggNOGiCOG2202.
HOGENOMiHOG000148074.
KOiK03776.
OMAiDISRQIT.
OrthoDBiEOG6G4VQG.

Enzyme and pathway databases

BioCyciBAMB339670:GH48-4792-MONOMER.

Family and domain databases

InterProiIPR004090. Chemotax_Me-accpt_rcpt.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
IPR001610. PAC.
IPR000014. PAS.
[Graphical view]
PfamiPF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
PF13426. PAS_9. 1 hit.
[Graphical view]
PRINTSiPR00260. CHEMTRNSDUCR.
SMARTiSM00283. MA. 1 hit.
SM00086. PAC. 1 hit.
[Graphical view]
SUPFAMiSSF55785. SSF55785. 1 hit.
TIGRFAMsiTIGR00229. sensory_box. 1 hit.
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50112. PAS. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of chromosome 2 of Burkholderia cepacia AMMD."
    Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Pitluck S., Bruce D., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L.
    , Kyrpides N., Kim E., Parke J., Coenye T., Konstantinidis K., Ramette A., Tiedje J., Richardson P.
    Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC BAA-244 / AMMDImported.

Entry informationi

Entry nameiQ0B6F8_BURCM
AccessioniPrimary (citable) accession number: Q0B6F8
Entry historyi
Integrated into UniProtKB/TrEMBL: October 17, 2006
Last sequence update: October 17, 2006
Last modified: June 24, 2015
This is version 55 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.