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Q0B640 (Q0B640_BURCM) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 45. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length541 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Ontologies

Keywords
   DomainSignal EMBL ABI90383.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processchemotaxis

Inferred from electronic annotation. Source: InterPro

   Cellular_componentintegral component of membrane

Inferred from electronic annotation. Source: InterPro

   Molecular_functiontransmembrane signaling receptor activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2525 Potential EMBL ABI90383.1
Chain26 – 541516 Potential EMBL ABI90383.1
PRO_5000128067

Sequences

Sequence LengthMass (Da)Tools
Q0B640 [UniParc].

Last modified October 17, 2006. Version 1.
Checksum: 94F429B1CAF0497C

FASTA54156,451
        10         20         30         40         50         60 
MFGKIKLASG LLGVLTVFCL FLVAIEALGF WALASTRSGV DDLSNVAIAQ VGAASQASER 

        70         80         90        100        110        120 
LLDARVNLSR AGTRMVRGGP KPDEIIRHAS ASLAEADKAF AALTAAQAVD ATNRAQVAAL 

       130        140        150        160        170        180 
AERYRALRGA LGELVQFLDA DNIQAFLDQP TQRFQDAYLA ELHRFVDYGG ASSRAALDTI 

       190        200        210        220        230        240 
DSGMQWFKWV GIVLLVAMLA ASAAIYAGAR RAVVAPLDEA GRHFERIAQG RLDEAVRPAG 

       250        260        270        280        290        300 
VFEIDRMLRG LAAMQASIAD TVRTVRQASD AIHLGAGEIA GGNADLSART GTQAASLEET 

       310        320        330        340        350        360 
AASMEELTAT VRQNTDSARA ASALADAALD ATRHGGGVVD SVIDRMRGIA QSSGRIAEII 

       370        380        390        400        410        420 
SVIDGIAFQT NILALNAAVE AARAGEQGRG FAVVAGEVRS LAQRSAQSAK EIKALIEESV 

       430        440        450        460        470        480 
AQIDGGSELV ERAGDAMRTV SASITRVVQT MSEITAASVE QSVGIEQVNQ AVTQMDQLTQ 

       490        500        510        520        530        540 
QNAALVEEVA AAAASLNEQT AHLMQAVSVF ELGDARAIHG VREQRAPSFA DAGYDAAGSA 


A 

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References

[1]"Complete sequence of chromosome 2 of Burkholderia cepacia AMMD."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Pitluck S., Bruce D., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L. expand/collapse author list , Kyrpides N., Kim E., Parke J., Coenye T., Konstantinidis K., Ramette A., Tiedje J., Richardson P.
Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC BAA-244 / AMMD.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000441 Genomic DNA. Translation: ABI90383.1.
RefSeqYP_776717.1. NC_008391.1.

3D structure databases

ProteinModelPortalQ0B640.
SMRQ0B640. Positions 289-512.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING339670.Bamb_4834.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABI90383; ABI90383; Bamb_4834.
GeneID4313725.
KEGGbam:Bamb_4834.
PATRIC19025629. VBIBurAmb61564_5065.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0840.
HOGENOMHOG000148074.
KOK05875.
OMAQMMAEIS.
OrthoDBEOG6G4VQG.
ProtClustDBCLSK929795.

Enzyme and pathway databases

BioCycBAMB339670:GH48-4911-MONOMER.

Family and domain databases

Gene3D1.20.120.30. 1 hit.
InterProIPR004090. Chemotax_Me-accpt_rcpt.
IPR003122. Chemotax_Me-accpt_rcpt_lig-bd.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamPF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
PF02203. TarH. 1 hit.
[Graphical view]
PRINTSPR00260. CHEMTRNSDUCR.
SMARTSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
SUPFAMSSF47170. SSF47170. 1 hit.
PROSITEPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ0B640_BURCM
AccessionPrimary (citable) accession number: Q0B640
Entry history
Integrated into UniProtKB/TrEMBL: October 17, 2006
Last sequence update: October 17, 2006
Last modified: February 19, 2014
This is version 45 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)