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Q0B5T2 (Q0B5T2_BURCM) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 46. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Malate synthase G HAMAP MF_00641
EC=2.3.3.9 HAMAP MF_00641
Gene names
Name:glcB HAMAP MF_00641
Ordered Locus Names:Bamb_4942
OrganismBurkholderia ambifaria (strain ATCC BAA-244 / AMMD) (Burkholderia cepacia (strain AMMD)) [Complete proteome] [HAMAP] EMBL ABI90491.1
Taxonomic identifier339670 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Burkholderiaceae › Burkholderia › Burkholderia cepacia complex

Protein attributes

Sequence length724 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Acetyl-CoA + H2O + glyoxylate = (S)-malate + CoA. HAMAP MF_00641 SAAS SAAS006253

Pathway

Carbohydrate metabolism; glyoxylate cycle; (S)-malate from isocitrate: step 2/2. HAMAP MF_00641 SAAS SAAS006253

Subunit structure

Monomer By similarity. HAMAP MF_00641 SAAS SAAS006253

Subcellular location

Cytoplasm By similarity HAMAP MF_00641.

Sequence similarities

Belongs to the malate synthase family. GlcB subfamily. HAMAP MF_00641

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site3361Proton acceptor By similarity HAMAP MF_00641
Active site6291Proton donor By similarity HAMAP MF_00641

Sequences

Sequence LengthMass (Da)Tools
Q0B5T2 [UniParc].

Last modified October 17, 2006. Version 1.
Checksum: 15F66EB195C85304

FASTA72478,441
        10         20         30         40         50         60 
MIDQAGLQVA PALSQFIENE ALPGTGIDKA AFWSGFSALV HDLAPRNREL LAERDRLQHE 

        70         80         90        100        110        120 
LDTWHRAHPG PVRDHAAFRA FLEQIGYLVP VPANVAAATA NVDSEIATQA GPQLVVPLSN 

       130        140        150        160        170        180 
ARYALNAANA RWGSLYDALY GTDALPEDGG AERTSAYNPT RGQRVIDYAR NVLDNAAPLA 

       190        200        210        220        230        240 
SGSHRDALRY RVEDGQLAVE TGKGVVHLAH PAQFVGYQGA AGAPSAILLK NNGLHIEIQI 

       250        260        270        280        290        300 
DASTPIGRAD LANVKDVVLE AAVSTIIDCE DSVAAVDAED KVQLYRNWLG LMQGTLVEEV 

       310        320        330        340        350        360 
AKGGKTFTRR LNADREYTTP AGGTLSLHGR SLLFVRNVGH LMTNGAVLDR DGNEIPEGIL 

       370        380        390        400        410        420 
DGVVTTLCAL HDLKAKRNSR TGSIYIVKPK MHGPVEVAFA DTLFARIEDL YGLPRNTLKM 

       430        440        450        460        470        480 
GIMDEERRTS VNLAACIAAA AARVAFINTG FLDRTGDEMH TAMEAGPMIR KGEMKSSAWI 

       490        500        510        520        530        540 
TAYERNNVLA GLSAGLRGRA QIGKGMWAMP DLMHAMLEQK IAHPRAGANT AWVPSPTAAT 

       550        560        570        580        590        600 
LHALHYHQVD VQAVQQELEK TSYASERDAL LEGLLTVPVV ERAAWSESEI LSEVENNAQG 

       610        620        630        640        650        660 
ILGYVVRWVE QGVGCSKVPD IHDVGLMEDR ATLRISSQHI ANWLRHGVIT EAFVLDVFKR 

       670        680        690        700        710        720 
MARVVDQQNA GDPNYRPMAP DYGQSTAFKA ACALALQGTS QPSGYTEPLL HRFRLAFKAQ 


QQGA

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References

[1]"Complete sequence of chromosome 2 of Burkholderia cepacia AMMD."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Pitluck S., Bruce D., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L. expand/collapse author list , Kyrpides N., Kim E., Parke J., Coenye T., Konstantinidis K., Ramette A., Tiedje J., Richardson P.
Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000441 Genomic DNA. Translation: ABI90491.1.
RefSeqYP_776825.1. NC_008391.1.

3D structure databases

ProteinModelPortalQ0B5T2.
SMRQ0B5T2. Positions 2-715.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ0B5T2.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4313833.
GenomeReviewsGene locus Bamb_4942 in contig CP000441_GR.
KEGGbam:Bamb_4942.
NMPDRfig|339670.3.peg.4855.
PATRIC19025865. VBIBurAmb61564_5183.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2225.
HOGENOMHBG350005.
OMAENANWSV.
PhylomeDBQ0B5T2.
ProtClustDBPRK02999.

Family and domain databases

HAMAPMF_00641. Malate_synth_G.
[Tree]
InterProIPR011076. Malate_synth-like.
IPR023310. Malate_synth_G_beta_sub_dom.
IPR001465. Malate_synthase.
IPR006253. Malate_synthG.
[Graphical view]
Gene3DG3DSA:2.170.170.11. Malate_synth_G_beta_sub_dom. 2 hits.
KOK01638.
PANTHERPTHR21631:SF1. Malate_synthase. 1 hit.
PfamPF01274. Malate_synthase. 1 hit.
[Graphical view]
SUPFAMSSF51645. Malat_synth_like. 1 hit.
TIGRFAMsTIGR01345. Malate_syn_G. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ0B5T2_BURCM
AccessionPrimary (citable) accession number: Q0B5T2
Entry history
Integrated into UniProtKB/TrEMBL: October 17, 2006
Last sequence update: October 17, 2006
Last modified: December 14, 2011
This is version 46 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info