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Protein
Submitted name:

3-carboxy-cis,cis-muconate cycloisomerase

Gene

Bamb_5019

Organism
Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) (Burkholderia cepacia (strain AMMD))
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

IsomeraseImported

Enzyme and pathway databases

BioCyciBAMB339670:GH48-5096-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
3-carboxy-cis,cis-muconate cycloisomeraseImported (EC:5.5.1.2Imported)
Gene namesi
Ordered Locus Names:Bamb_5019Imported
OrganismiBurkholderia ambifaria (strain ATCC BAA-244 / AMMD) (Burkholderia cepacia (strain AMMD))Imported
Taxonomic identifieri339670 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderiaBurkholderia cepacia complex
Proteomesi
  • UP000000662 Componenti: Chromosome 2

Interactioni

Protein-protein interaction databases

STRINGi339670.Bamb_5019.

Structurei

3D structure databases

ProteinModelPortaliQ0B5K5.
SMRiQ0B5K5. Positions 11-451.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini366 – 44580ADSL_CInterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiENOG4107RAW. Bacteria.
COG0015. LUCA.
HOGENOMiHOG000033914.
KOiK01857.
OMAiHRATPMI.
OrthoDBiPOG091H0168.

Family and domain databases

Gene3Di1.10.275.10. 1 hit.
InterProiIPR019468. AdenyloSucc_lyase_C.
IPR024083. Fumarase/histidase_N.
IPR020557. Fumarate_lyase_CS.
IPR000362. Fumarate_lyase_fam.
IPR022761. Fumarate_lyase_N.
IPR008948. L-Aspartase-like.
IPR012789. Protocat_PcaB.
[Graphical view]
PANTHERiPTHR11444. PTHR11444. 1 hit.
PfamiPF10397. ADSL_C. 1 hit.
PF00206. Lyase_1. 1 hit.
[Graphical view]
PRINTSiPR00149. FUMRATELYASE.
SMARTiSM00998. ADSL_C. 1 hit.
[Graphical view]
SUPFAMiSSF48557. SSF48557. 1 hit.
TIGRFAMsiTIGR02426. protocat_pcaB. 1 hit.
PROSITEiPS00163. FUMARATE_LYASES. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q0B5K5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLEDSARLTS LICGTEPLNR IWSPRATIQR MLDVEAALAR ALAAQQVIPA
60 70 80 90 100
TAVAPIERAC DADRLDADAL AHGAALGGNL AIPLVKQLTA QVKADDPEAA
110 120 130 140 150
KFVHWGATSQ DIIDTATVLQ LRDTLDVLEP LLDEACASLA TLARTHRATP
160 170 180 190 200
MIGRTWLQQA LPITLGLKFA QWLDALLRHR ARFAELRERA LVLQFGGAAG
210 220 230 240 250
TLASLREHAA GVSAALAADL KLALPAVPWH TQRDRIAEAA SCFGMLIGTL
260 270 280 290 300
GKIARDVSLQ MQTEVGELGE PAAAGKGGSS TMPHKRNPVG CAAVLTAAVR
310 320 330 340 350
APNLVATVFA GMVQEHERAL GGWQAEWDAL PDLARLTGGA LAQIAQIVAG
360 370 380 390 400
LDVNTERLAA NLDLTHGLIL GEAVMLALGD RIGRLDAHHV VEHASKEAVR
410 420 430 440 450
TGATLFDVLA ADATVSAHLS RDALARLLDP AHYVGEAQAY VDAVLALHAQ
460
HASPKQPGEH
Length:460
Mass (Da):48,524
Last modified:October 17, 2006 - v1
Checksum:i83F1E5472A34D7B3
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000441 Genomic DNA. Translation: ABI90568.1.
RefSeqiWP_011659953.1. NZ_CP009799.1.

Genome annotation databases

EnsemblBacteriaiABI90568; ABI90568; Bamb_5019.
KEGGibam:Bamb_5019.
PATRICi19026025. VBIBurAmb61564_5263.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000441 Genomic DNA. Translation: ABI90568.1.
RefSeqiWP_011659953.1. NZ_CP009799.1.

3D structure databases

ProteinModelPortaliQ0B5K5.
SMRiQ0B5K5. Positions 11-451.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi339670.Bamb_5019.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABI90568; ABI90568; Bamb_5019.
KEGGibam:Bamb_5019.
PATRICi19026025. VBIBurAmb61564_5263.

Phylogenomic databases

eggNOGiENOG4107RAW. Bacteria.
COG0015. LUCA.
HOGENOMiHOG000033914.
KOiK01857.
OMAiHRATPMI.
OrthoDBiPOG091H0168.

Enzyme and pathway databases

BioCyciBAMB339670:GH48-5096-MONOMER.

Family and domain databases

Gene3Di1.10.275.10. 1 hit.
InterProiIPR019468. AdenyloSucc_lyase_C.
IPR024083. Fumarase/histidase_N.
IPR020557. Fumarate_lyase_CS.
IPR000362. Fumarate_lyase_fam.
IPR022761. Fumarate_lyase_N.
IPR008948. L-Aspartase-like.
IPR012789. Protocat_PcaB.
[Graphical view]
PANTHERiPTHR11444. PTHR11444. 1 hit.
PfamiPF10397. ADSL_C. 1 hit.
PF00206. Lyase_1. 1 hit.
[Graphical view]
PRINTSiPR00149. FUMRATELYASE.
SMARTiSM00998. ADSL_C. 1 hit.
[Graphical view]
SUPFAMiSSF48557. SSF48557. 1 hit.
TIGRFAMsiTIGR02426. protocat_pcaB. 1 hit.
PROSITEiPS00163. FUMARATE_LYASES. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ0B5K5_BURCM
AccessioniPrimary (citable) accession number: Q0B5K5
Entry historyi
Integrated into UniProtKB/TrEMBL: October 17, 2006
Last sequence update: October 17, 2006
Last modified: September 7, 2016
This is version 64 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.