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Q0B4J6

- Q0B4J6_BURCM

UniProt

Q0B4J6 - Q0B4J6_BURCM

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Protein
Submitted name: Methyl-accepting chemotaxis sensory transducer
Gene
Bamb_5380
Organism
Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) (Burkholderia cepacia (strain AMMD))
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. transmembrane signaling receptor activity Source: InterPro

GO - Biological processi

  1. chemotaxis Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciBAMB339670:GH48-5457-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Methyl-accepting chemotaxis sensory transducerImported
Gene namesi
Ordered Locus Names:Bamb_5380Imported
OrganismiBurkholderia ambifaria (strain ATCC BAA-244 / AMMD) (Burkholderia cepacia (strain AMMD))Imported
Taxonomic identifieri339670 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderiaBurkholderia cepacia complex
ProteomesiUP000000662: Chromosome 2

Subcellular locationi

GO - Cellular componenti

  1. integral component of membrane Source: InterPro
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 3535 PredictedImported
Add
BLAST
Chaini36 – 520485 PredictedImported
PRO_5000128172Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi339670.Bamb_5380.

Structurei

3D structure databases

ProteinModelPortaliQ0B4J6.
SMRiQ0B4J6. Positions 291-516.

Family & Domainsi

Keywords - Domaini

SignalImported

Phylogenomic databases

eggNOGiCOG0840.
HOGENOMiHOG000148074.
OMAiHRIVWAM.
OrthoDBiEOG6G4VQG.

Family and domain databases

InterProiIPR004090. Chemotax_Me-accpt_rcpt.
IPR003122. Chemotax_Me-accpt_rcpt_lig-bd.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamiPF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
PF02203. TarH. 1 hit.
[Graphical view]
PRINTSiPR00260. CHEMTRNSDUCR.
SMARTiSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q0B4J6-1 [UniParc]FASTAAdd to Basket

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MRKLTIRGGL VATIAGYTAL LVLVVGACIA ALYAGNGSLE AMYRDDTASL    50
LHLKTSSERM LVLRERVSDV AQIISAGQPA KAEIAQLHTL LKQSNDELDA 100
YTRLHARDAD EQALFDTLQT RRRTLLDQVF LKAMSQLDQD NAFDFLDTHR 150
TAQPALFTAY QDAIDALESF QVARQKARYD AAGARFHRIV WAMVAVALFA 200
LIVGFLAQRV LAKAIIEPIH LAVDHFDRIS KGDLTGTVVI PGKNEMAYLL 250
NALKRMQDGL VETVTQVRTS TETIVGDVRT IASGNVDLSA RTEQQAVSLQ 300
QAAASVEQLT ATVRQNADNA RDARTYAQGA AGIAARGGDA MQRVVETMSA 350
ISHSSARISG IVGVIESIAF QTNILALNAA VEAARAGEQG RGFAVVATEV 400
RGLAQRCASA AKEIRELIGN STQRVEDGSG LVALAGSAMS ELVTAVERVN 450
AIMGETSIAF DEQTSGIEQV NAAVIQMEQT MQRNAALVEE AAAAALSLED 500
QSTRLSDAVA QFRVGEAAMA 520
Length:520
Mass (Da):55,598
Last modified:October 17, 2006 - v1
Checksum:i177ABBF3BB7643AE
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000441 Genomic DNA. Translation: ABI90927.1.
RefSeqiYP_777261.1. NC_008391.1.

Genome annotation databases

EnsemblBacteriaiABI90927; ABI90927; Bamb_5380.
GeneIDi4314269.
KEGGibam:Bamb_5380.
PATRICi19026759. VBIBurAmb61564_5630.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000441 Genomic DNA. Translation: ABI90927.1 .
RefSeqi YP_777261.1. NC_008391.1.

3D structure databases

ProteinModelPortali Q0B4J6.
SMRi Q0B4J6. Positions 291-516.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 339670.Bamb_5380.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABI90927 ; ABI90927 ; Bamb_5380 .
GeneIDi 4314269.
KEGGi bam:Bamb_5380.
PATRICi 19026759. VBIBurAmb61564_5630.

Phylogenomic databases

eggNOGi COG0840.
HOGENOMi HOG000148074.
OMAi HRIVWAM.
OrthoDBi EOG6G4VQG.

Enzyme and pathway databases

BioCyci BAMB339670:GH48-5457-MONOMER.

Family and domain databases

InterProi IPR004090. Chemotax_Me-accpt_rcpt.
IPR003122. Chemotax_Me-accpt_rcpt_lig-bd.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
[Graphical view ]
Pfami PF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
PF02203. TarH. 1 hit.
[Graphical view ]
PRINTSi PR00260. CHEMTRNSDUCR.
SMARTi SM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view ]
PROSITEi PS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete sequence of chromosome 2 of Burkholderia cepacia AMMD."
    Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Pitluck S., Bruce D., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L.
    , Kyrpides N., Kim E., Parke J., Coenye T., Konstantinidis K., Ramette A., Tiedje J., Richardson P.
    Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC BAA-244 / AMMD.

Entry informationi

Entry nameiQ0B4J6_BURCM
AccessioniPrimary (citable) accession number: Q0B4J6
Entry historyi
Integrated into UniProtKB/TrEMBL: October 17, 2006
Last sequence update: October 17, 2006
Last modified: May 14, 2014
This is version 41 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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