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Q0B4J6 (Q0B4J6_BURCM) Unreviewed, UniProtKB/TrEMBL

Last modified May 29, 2013. Version 38. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Methyl-accepting chemotaxis sensory transducer EMBL ABI90927.1
Gene names
Ordered Locus Names:Bamb_5380 EMBL ABI90927.1
OrganismBurkholderia ambifaria (strain ATCC BAA-244 / AMMD) (Burkholderia cepacia (strain AMMD)) [Complete proteome] [HAMAP] EMBL ABI90927.1
Taxonomic identifier339670 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Burkholderiaceae › Burkholderia › Burkholderia cepacia complex ›

Protein attributes

Sequence length520 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Ontologies

Keywords
   DomainSignal EMBL ABI90927.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processchemotaxis

Inferred from electronic annotation. Source: InterPro

   Cellular_componentintegral to membrane

Inferred from electronic annotation. Source: InterPro

   Molecular_functiontransmembrane signaling receptor activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 3535 Potential EMBL ABI90927.1
Chain36 – 520485 Potential
PRO_5000128172

Sequences

Sequence LengthMass (Da)Tools
Q0B4J6 [UniParc].

Last modified October 17, 2006. Version 1.
Checksum: 177ABBF3BB7643AE

FASTA52055,598
        10         20         30         40         50         60 
MRKLTIRGGL VATIAGYTAL LVLVVGACIA ALYAGNGSLE AMYRDDTASL LHLKTSSERM 

        70         80         90        100        110        120 
LVLRERVSDV AQIISAGQPA KAEIAQLHTL LKQSNDELDA YTRLHARDAD EQALFDTLQT 

       130        140        150        160        170        180 
RRRTLLDQVF LKAMSQLDQD NAFDFLDTHR TAQPALFTAY QDAIDALESF QVARQKARYD 

       190        200        210        220        230        240 
AAGARFHRIV WAMVAVALFA LIVGFLAQRV LAKAIIEPIH LAVDHFDRIS KGDLTGTVVI 

       250        260        270        280        290        300 
PGKNEMAYLL NALKRMQDGL VETVTQVRTS TETIVGDVRT IASGNVDLSA RTEQQAVSLQ 

       310        320        330        340        350        360 
QAAASVEQLT ATVRQNADNA RDARTYAQGA AGIAARGGDA MQRVVETMSA ISHSSARISG 

       370        380        390        400        410        420 
IVGVIESIAF QTNILALNAA VEAARAGEQG RGFAVVATEV RGLAQRCASA AKEIRELIGN 

       430        440        450        460        470        480 
STQRVEDGSG LVALAGSAMS ELVTAVERVN AIMGETSIAF DEQTSGIEQV NAAVIQMEQT 

       490        500        510        520 
MQRNAALVEE AAAAALSLED QSTRLSDAVA QFRVGEAAMA

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References

[1]"Complete sequence of chromosome 2 of Burkholderia cepacia AMMD."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Pitluck S., Bruce D., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L. expand/collapse author list , Kyrpides N., Kim E., Parke J., Coenye T., Konstantinidis K., Ramette A., Tiedje J., Richardson P.
Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC BAA-244 / AMMD.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000441 Genomic DNA. Translation: ABI90927.1.
RefSeqYP_777261.1. NC_008391.1.

3D structure databases

ProteinModelPortalQ0B4J6.
SMRQ0B4J6. Positions 291-516.
ModBaseSearch...

Protein-protein interaction databases

STRING339670.Bamb_5380.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABI90927; ABI90927; Bamb_5380.
GeneID4314269.
KEGGbam:Bamb_5380.
PATRIC19026759. VBIBurAmb61564_5630.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0840.
HOGENOMHOG000148074.
OMAKAIIEPI.
ProtClustDBCLSK941481.

Enzyme and pathway databases

BioCycBAMB339670:GH48-5457-MONOMER.

Family and domain databases

InterProIPR004090. Chemotax_Me-accpt_rcpt.
IPR003122. Chemotax_Me-accpt_rcpt_lig-bd.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamPF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
PF02203. TarH. 1 hit.
[Graphical view]
PRINTSPR00260. CHEMTRNSDUCR.
SMARTSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ0B4J6_BURCM
AccessionPrimary (citable) accession number: Q0B4J6
Entry history
Integrated into UniProtKB/TrEMBL: October 17, 2006
Last sequence update: October 17, 2006
Last modified: May 29, 2013
This is version 38 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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