Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Methyl-accepting chemotaxis sensory transducer

Gene

Bamb_5380

Organism
Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) (Burkholderia cepacia (strain AMMD))
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. transmembrane signaling receptor activity Source: InterPro

GO - Biological processi

  1. chemotaxis Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciBAMB339670:GH48-5457-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Methyl-accepting chemotaxis sensory transducerImported
Gene namesi
Ordered Locus Names:Bamb_5380Imported
OrganismiBurkholderia ambifaria (strain ATCC BAA-244 / AMMD) (Burkholderia cepacia (strain AMMD))Imported
Taxonomic identifieri339670 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderiaBurkholderia cepacia complex
ProteomesiUP000000662 Componenti: Chromosome 2

Subcellular locationi

GO - Cellular componenti

  1. integral component of membrane Source: InterPro
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 3535 PotentialImportedAdd
BLAST
Chaini36 – 520485 PotentialImportedPRO_5000128172Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi339670.Bamb_5380.

Structurei

3D structure databases

SMRiQ0B4J6. Positions 291-516.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

SignalImported

Phylogenomic databases

eggNOGiCOG0840.
HOGENOMiHOG000148074.
OMAiHRIVWAM.
OrthoDBiEOG6G4VQG.

Family and domain databases

InterProiIPR004090. Chemotax_Me-accpt_rcpt.
IPR003122. Chemotax_Me-accpt_rcpt_lig-bd.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamiPF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
PF02203. TarH. 1 hit.
[Graphical view]
PRINTSiPR00260. CHEMTRNSDUCR.
SMARTiSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q0B4J6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRKLTIRGGL VATIAGYTAL LVLVVGACIA ALYAGNGSLE AMYRDDTASL
60 70 80 90 100
LHLKTSSERM LVLRERVSDV AQIISAGQPA KAEIAQLHTL LKQSNDELDA
110 120 130 140 150
YTRLHARDAD EQALFDTLQT RRRTLLDQVF LKAMSQLDQD NAFDFLDTHR
160 170 180 190 200
TAQPALFTAY QDAIDALESF QVARQKARYD AAGARFHRIV WAMVAVALFA
210 220 230 240 250
LIVGFLAQRV LAKAIIEPIH LAVDHFDRIS KGDLTGTVVI PGKNEMAYLL
260 270 280 290 300
NALKRMQDGL VETVTQVRTS TETIVGDVRT IASGNVDLSA RTEQQAVSLQ
310 320 330 340 350
QAAASVEQLT ATVRQNADNA RDARTYAQGA AGIAARGGDA MQRVVETMSA
360 370 380 390 400
ISHSSARISG IVGVIESIAF QTNILALNAA VEAARAGEQG RGFAVVATEV
410 420 430 440 450
RGLAQRCASA AKEIRELIGN STQRVEDGSG LVALAGSAMS ELVTAVERVN
460 470 480 490 500
AIMGETSIAF DEQTSGIEQV NAAVIQMEQT MQRNAALVEE AAAAALSLED
510 520
QSTRLSDAVA QFRVGEAAMA
Length:520
Mass (Da):55,598
Last modified:October 17, 2006 - v1
Checksum:i177ABBF3BB7643AE
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000441 Genomic DNA. Translation: ABI90927.1.
RefSeqiYP_777261.1. NC_008391.1.

Genome annotation databases

EnsemblBacteriaiABI90927; ABI90927; Bamb_5380.
KEGGibam:Bamb_5380.
PATRICi19026759. VBIBurAmb61564_5630.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000441 Genomic DNA. Translation: ABI90927.1.
RefSeqiYP_777261.1. NC_008391.1.

3D structure databases

SMRiQ0B4J6. Positions 291-516.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi339670.Bamb_5380.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABI90927; ABI90927; Bamb_5380.
KEGGibam:Bamb_5380.
PATRICi19026759. VBIBurAmb61564_5630.

Phylogenomic databases

eggNOGiCOG0840.
HOGENOMiHOG000148074.
OMAiHRIVWAM.
OrthoDBiEOG6G4VQG.

Enzyme and pathway databases

BioCyciBAMB339670:GH48-5457-MONOMER.

Family and domain databases

InterProiIPR004090. Chemotax_Me-accpt_rcpt.
IPR003122. Chemotax_Me-accpt_rcpt_lig-bd.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamiPF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
PF02203. TarH. 1 hit.
[Graphical view]
PRINTSiPR00260. CHEMTRNSDUCR.
SMARTiSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of chromosome 2 of Burkholderia cepacia AMMD."
    Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Pitluck S., Bruce D., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L.
    , Kyrpides N., Kim E., Parke J., Coenye T., Konstantinidis K., Ramette A., Tiedje J., Richardson P.
    Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC BAA-244 / AMMDImported.

Entry informationi

Entry nameiQ0B4J6_BURCM
AccessioniPrimary (citable) accession number: Q0B4J6
Entry historyi
Integrated into UniProtKB/TrEMBL: October 17, 2006
Last sequence update: October 17, 2006
Last modified: April 1, 2015
This is version 47 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.