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Protein
Submitted name:

Type III secretion outer membrane pore, YscC/HrcC family

Gene

Bamb_5871

Organism
Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) (Burkholderia cepacia (strain AMMD))
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Biological processi

Keywordsi

Biological processTransportUniRule annotation

Enzyme and pathway databases

BioCyciBAMB339670:GH48-5936-MONOMER

Names & Taxonomyi

Protein namesi
Submitted name:
Type III secretion outer membrane pore, YscC/HrcC familyImported
Gene namesi
Ordered Locus Names:Bamb_5871Imported
OrganismiBurkholderia ambifaria (strain ATCC BAA-244 / AMMD) (Burkholderia cepacia (strain AMMD))Imported
Taxonomic identifieri339670 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderiaBurkholderia cepacia complex
Proteomesi
  • UP000000662 Componenti: Chromosome 3

Subcellular locationi

  • Cell outer membrane UniRule annotation

GO - Cellular componenti

Interactioni

Protein-protein interaction databases

STRINGi339670.Bamb_5871

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini151 – 313Secretin_NInterPro annotationAdd BLAST163

Sequence similaritiesi

Belongs to the GSP D family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105K44 Bacteria
COG1450 LUCA
HOGENOMiHOG000214462
KOiK03219
OMAiYLMARIS
OrthoDBiPOG091H00DF

Family and domain databases

Gene3Di3.30.1370.120, 1 hit
InterProiView protein in InterPro
IPR005644 NolW-like
IPR038591 NolW-like_sf
IPR004846 T2SS/T3SS
IPR003522 T3SS_OM_pore_YscC
PfamiView protein in Pfam
PF00263 Secretin, 1 hit
PF03958 Secretin_N, 1 hit
PRINTSiPR01337 TYPE3OMGPROT
TIGRFAMsiTIGR02516 type_III_yscC, 1 hit

Sequencei

Sequence statusi: Complete.

Q0B356-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRWKASIVDY EAQGKDIKDV LRDFGASQGI PTRIAADVSG TVSGKFHLPP
60 70 80 90 100
RRFLDTLASS FGFVWYYDGE VLDITTAAEL QSTLVKLDSA DTGALRDALD
110 120 130 140 150
RLRISDERFP IVYDSAQGTA LVSGPPRYVQ MVTNVASRLD NNAAHRSGTQ
160 170 180 190 200
VRVFPLFHAW AHDRTVPIDG RQVTLQGVVA VLNGIYHPHM AKAADKRGGE
210 220 230 240 250
GEGGRPAGGV KRNTPINDVN GNAYNGPYIP PPVPSGAAGK GMFAGLTGQP
260 270 280 290 300
SPAVAAAVGE PPPPQNTSTA PASDDQLPVI VADQRTNSVV IRDTADRMDQ
310 320 330 340 350
YGKLIDRLDV KPQLIEIEAH IIEIDDDALR QLGVDWTAHN SHIDVQTGTG
360 370 380 390 400
TLGQNTYNGT LSQNFGQTAL AGNVLAAATP VGASVAAVLG DAGRYLMARI
410 420 430 440 450
SALQETKAAK IDASPKVVTL NNIEAVMDNQ TQFFVPVSGY TSGDLYSVST
460 470 480 490 500
GISLRVLPMV VEEDGRTRIK LDVAIQDGQL TDRTVSNLPV IQNSTINTQA
510 520 530 540 550
FIEEGQALLI AGYRADSATM GVTGVPGLSK IPLIGALFRT DSRQKSHMER
560
LFLLSPRVIS P
Length:561
Mass (Da):59,892
Last modified:October 17, 2006 - v1
Checksum:iD1B740DACC2C16F2
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000442 Genomic DNA Translation: ABI91417.1

Genome annotation databases

EnsemblBacteriaiABI91417; ABI91417; Bamb_5871
KEGGibam:Bamb_5871

Similar proteinsi

Entry informationi

Entry nameiQ0B356_BURCM
AccessioniPrimary (citable) accession number: Q0B356
Entry historyiIntegrated into UniProtKB/TrEMBL: October 17, 2006
Last sequence update: October 17, 2006
Last modified: March 28, 2018
This is version 62 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported
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Main funding by: National Institutes of Health