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Protein
Submitted name:

Methyl-accepting chemotaxis sensory transducer

Gene

Bamb_6127

Organism
Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) (Burkholderia cepacia (strain AMMD))
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. transmembrane signaling receptor activity Source: InterPro

GO - Biological processi

  1. chemotaxis Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciBAMB339670:GH48-6210-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Methyl-accepting chemotaxis sensory transducerImported
Gene namesi
Ordered Locus Names:Bamb_6127Imported
OrganismiBurkholderia ambifaria (strain ATCC BAA-244 / AMMD) (Burkholderia cepacia (strain AMMD))Imported
Taxonomic identifieri339670 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderiaBurkholderia cepacia complex
ProteomesiUP000000662: Chromosome 3

Subcellular locationi

GO - Cellular componenti

  1. integral component of membrane Source: InterPro
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 3434 PotentialImportedAdd
BLAST
Chaini35 – 519485 PotentialImportedPRO_5000128309Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi339670.Bamb_6127.

Structurei

3D structure databases

ProteinModelPortaliQ0B2F2.
SMRiQ0B2F2. Positions 292-517.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

SignalImported

Phylogenomic databases

eggNOGiCOG0840.
HOGENOMiHOG000148074.
KOiK03406.
OMAiVYSANVE.
OrthoDBiEOG6G4VQG.

Family and domain databases

InterProiIPR004090. Chemotax_Me-accpt_rcpt.
IPR003122. Chemotax_Me-accpt_rcpt_lig-bd.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamiPF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
PF02203. TarH. 1 hit.
[Graphical view]
PRINTSiPR00260. CHEMTRNSDUCR.
SMARTiSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
SUPFAMiSSF47170. SSF47170. 1 hit.
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q0B2F2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRDLKVKNSL LAVLATFAAM IIVGGIVGVV ALGSANTNAK RLHAIATQTS
60 70 80 90 100
LVNDAYKDST RTRSALVRAY SALKEHNDPA QRDSALQSAQ RTFDLSAKET
110 120 130 140 150
QAFKDTAPIG SLGADLKQAL VESSTHLAGV LARASDALRN GDTAAYAEIN
160 170 180 190 200
DKEITLAGQV YSANVEKFQR TANKLAEDTI DDGNAAYTRI VALVGIGVAL
210 220 230 240 250
ALALIAATHF ALRAIVSRPL ANAAALLDRI ASNDLTVNVP DAGRNEIGQL
260 270 280 290 300
FAAMKRMQAG LATTVTGMRD SSDAIHTAAR EIAAGNLDLS SRTEQQSASL
310 320 330 340 350
EETAASMEQL TSTVRQNADN AQQASTLAAS AADLAQQGGE LVGRAVDMMG
360 370 380 390 400
VINTSSQKIA EITAMIDGIA FQTNILALNA AVESARAGEH GRGFAVVAGE
410 420 430 440 450
VRTLAQRSAG AAREIRQLIG ASIDDVRDGN ALVSQAGRAM DEIVSSVRRV
460 470 480 490 500
ATIMTEITTA TVEQSAGIDQ VGQAVTQMDQ MTQQNAALVE QASAAASALE
510
QQAGSMQAAM SVFRIARGR
Length:519
Mass (Da):54,101
Last modified:October 17, 2006 - v1
Checksum:iBCFE647E32D22085
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000442 Genomic DNA. Translation: ABI91671.1.
RefSeqiWP_011661002.1. NC_008392.1.
YP_778005.1. NC_008392.1.

Genome annotation databases

EnsemblBacteriaiABI91671; ABI91671; Bamb_6127.
GeneIDi4315031.
KEGGibam:Bamb_6127.
PATRICi19028334. VBIBurAmb61564_6411.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000442 Genomic DNA. Translation: ABI91671.1.
RefSeqiWP_011661002.1. NC_008392.1.
YP_778005.1. NC_008392.1.

3D structure databases

ProteinModelPortaliQ0B2F2.
SMRiQ0B2F2. Positions 292-517.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi339670.Bamb_6127.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABI91671; ABI91671; Bamb_6127.
GeneIDi4315031.
KEGGibam:Bamb_6127.
PATRICi19028334. VBIBurAmb61564_6411.

Phylogenomic databases

eggNOGiCOG0840.
HOGENOMiHOG000148074.
KOiK03406.
OMAiVYSANVE.
OrthoDBiEOG6G4VQG.

Enzyme and pathway databases

BioCyciBAMB339670:GH48-6210-MONOMER.

Family and domain databases

InterProiIPR004090. Chemotax_Me-accpt_rcpt.
IPR003122. Chemotax_Me-accpt_rcpt_lig-bd.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamiPF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
PF02203. TarH. 1 hit.
[Graphical view]
PRINTSiPR00260. CHEMTRNSDUCR.
SMARTiSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
SUPFAMiSSF47170. SSF47170. 1 hit.
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of chromosome 3 of Burkholderia cepacia AMMD."
    Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Pitluck S., Bruce D., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L.
    , Kyrpides N., Kim E., Parke J., Coenye T., Konstantinidis K., Ramette A., Tiedje J., Richardson P.
    Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC BAA-244 / AMMDImported.

Entry informationi

Entry nameiQ0B2F2_BURCM
AccessioniPrimary (citable) accession number: Q0B2F2
Entry historyi
Integrated into UniProtKB/TrEMBL: October 17, 2006
Last sequence update: October 17, 2006
Last modified: February 4, 2015
This is version 47 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.