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Protein
Submitted name:

Uncharacterized protein

Gene

Swol_0183

Organism
Syntrophomonas wolfei subsp. wolfei (strain DSM 2245B / Goettingen)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei96 – 961FMNCombined sources
Binding sitei123 – 1231FMNCombined sources
Binding sitei144 – 1441FMN; via amide nitrogen and carbonyl oxygenCombined sources

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi44 – 507FMNCombined sources
Nucleotide bindingi62 – 698FMNCombined sources

GO - Molecular functioni

Complete GO annotation...

Keywords - Ligandi

Flavoprotein, FMNCombined sources, Nucleotide-bindingCombined sources

Enzyme and pathway databases

BioCyciSWOL335541:GHL1-197-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Ordered Locus Names:Swol_0183Imported
OrganismiSyntrophomonas wolfei subsp. wolfei (strain DSM 2245B / Goettingen)Imported
Taxonomic identifieri335541 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesSyntrophomonadaceaeSyntrophomonas
Proteomesi
  • UP000001968 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi335541.Swol_0183.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3IN6X-ray2.12A/B1-147[»]
ProteinModelPortaliQ0B0G9.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ0B0G9.

Family & Domainsi

Phylogenomic databases

eggNOGiENOG4106TM4. Bacteria.
ENOG410ZKU4. LUCA.
HOGENOMiHOG000118785.
OMAiNCLVFKI.

Family and domain databases

Gene3Di2.30.110.10. 1 hit.
InterProiIPR012349. Split_barrel_FMN-bd.
[Graphical view]
SUPFAMiSSF50475. SSF50475. 1 hit.

Sequencei

Sequence statusi: Complete.

Q0B0G9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLESVRKEWL EIMDRELLEK ARSLINANYI STTLSTVDRN YEVNIAVISV
60 70 80 90 100
LEMIGDDTII CARFGADKTY ANLKETGKGV FMVLLTDNDK SKDGIRVYVE
110 120 130 140
LSADLQEGEY FDRIKKRLDN TTYKNFPLKN CLVFKIVKIL PVSLLRK
Length:147
Mass (Da):16,917
Last modified:October 17, 2006 - v1
Checksum:i142E9268895D5AC6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000448 Genomic DNA. Translation: ABI67535.1.

Genome annotation databases

EnsemblBacteriaiABI67535; ABI67535; Swol_0183.
KEGGiswo:Swol_0183.
PATRICi23855056. VBISynWol51738_0199.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000448 Genomic DNA. Translation: ABI67535.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3IN6X-ray2.12A/B1-147[»]
ProteinModelPortaliQ0B0G9.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi335541.Swol_0183.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABI67535; ABI67535; Swol_0183.
KEGGiswo:Swol_0183.
PATRICi23855056. VBISynWol51738_0199.

Phylogenomic databases

eggNOGiENOG4106TM4. Bacteria.
ENOG410ZKU4. LUCA.
HOGENOMiHOG000118785.
OMAiNCLVFKI.

Enzyme and pathway databases

BioCyciSWOL335541:GHL1-197-MONOMER.

Miscellaneous databases

EvolutionaryTraceiQ0B0G9.

Family and domain databases

Gene3Di2.30.110.10. 1 hit.
InterProiIPR012349. Split_barrel_FMN-bd.
[Graphical view]
SUPFAMiSSF50475. SSF50475. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Crystal structure of FMN-binding protein (YP_752906.1) from Syntrophomonas wolfei str. Goettingen at 2.12 A resolution."
    Joint Center for Structural Genomics (JCSG)
    Submitted (AUG-2009) to the PDB data bank
    Cited for: X-RAY CRYSTALLOGRAPHY (2.12 ANGSTROMS) IN COMPLEX WITH FMN.
  2. "The genome of Syntrophomonas wolfei: new insights into syntrophic metabolism and biohydrogen production."
    Sieber J.R., Sims D.R., Han C., Kim E., Lykidis A., Lapidus A.L., McDonnald E., Rohlin L., Culley D.E., Gunsalus R., McInerney M.J.
    Environ. Microbiol. 12:2289-2301(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 2245B / GoettingenImported.

Entry informationi

Entry nameiQ0B0G9_SYNWW
AccessioniPrimary (citable) accession number: Q0B0G9
Entry historyi
Integrated into UniProtKB/TrEMBL: October 17, 2006
Last sequence update: October 17, 2006
Last modified: March 16, 2016
This is version 48 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.