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Q0B020 (Q0B020_SYNWW) Unreviewed, UniProtKB/TrEMBL

Last modified May 29, 2013. Version 42. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Transmembrane sensor domain-like protein EMBL ABI67684.1
Gene names
Ordered Locus Names:Swol_0343
OrganismSyntrophomonas wolfei subsp. wolfei (strain DSM 2245B / Goettingen) [Complete proteome] [HAMAP] EMBL ABI67684.1
Taxonomic identifier335541 [NCBI]
Taxonomic lineageBacteria › Firmicutes › Clostridia › Clostridiales › Syntrophomonadaceae › Syntrophomonas ›

Protein attributes

Sequence length638 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Cellular componentMembrane
   DomainTransmembrane EMBL ABI67684.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcyclic nucleotide biosynthetic process

Inferred from electronic annotation. Source: InterPro

intracellular signal transduction

Inferred from electronic annotation. Source: InterPro

   Cellular_componentintegral to membrane

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular_functionphosphorus-oxygen lyase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q0B020 [UniParc].

Last modified October 17, 2006. Version 1.
Checksum: 314FB30774440B2C

FASTA63870,855
        10         20         30         40         50         60 
MNLSYESHPL EEKKPRRIFS GISHNRFFIP ILLFLLLQGL VMLGFFTRSD LGLYDAFFRL 

        70         80         90        100        110        120 
KGASNPGEKV VIVAIDDSSI SRLGPPAWPR SVHARLLEKL KEARAVSFDL TFNSAQEARE 

       130        140        150        160        170        180 
DQAFASAIQK HGQVILAAKF TFEKDESGEL VQGFEPPLQE LMSGAAGLGF VNTPTDIDQR 

       190        200        210        220        230        240 
VRRSTLVDVN YFEVPFPSLA IATAMVAQDI SYEELKLEAD RLLLGKTEIP LSPLNQAMVK 

       250        260        270        280        290        300 
FWGPKATFKT ISYADVIEEK IPPAYFQDKI VLIGSITPED HDFVTTPYTT SNMVKGGALD 

       310        320        330        340        350        360 
TPGVEIHASI VQTFLEDSWY REAEKPFNMA FLLLAGLLTS LVVRGRGPWK GLIGTVLVTL 

       370        380        390        400        410        420 
ASIALVYGLW EYQRIWLSLA APLALILLTY VVVTATEFIR AELGRRKTKA MFSRYVSADV 

       430        440        450        460        470        480 
VDELLKNPDE ISLGGKKQVV TIMFADIRGF TAFSENKDPV DVINRLNEYL TAMTDSIQSH 

       490        500        510        520        530        540 
GGTLDKYLGD GLMAFFGAPV YFEDHVERAI KVAREIQVKV AELNHKWAEQ GAVPLLVAVG 

       550        560        570        580        590        600 
INTGPVVVGN VGSPERMDYT LIGEDANLAS RVEALTKLFE TLVLVSERSY DLLPEGETKA 

       610        620        630 
SLHYVGEELV KGFTHPIKVY SFTDLDLHFE KSQDKGFK

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References

[1]"The genome of Syntrophomonas wolfei: new insights into syntrophic metabolism and biohydrogen production."
Sieber J.R., Sims D.R., Han C., Kim E., Lykidis A., Lapidus A.L., McDonnald E., Rohlin L., Culley D.E., Gunsalus R., McInerney M.J.
Environ. Microbiol. 12:2289-2301(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 2245B / Goettingen.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000448 Genomic DNA. Translation: ABI67684.1.
RefSeqYP_753055.1. NC_008346.1.

3D structure databases

ProteinModelPortalQ0B020.
ModBaseSearch...

Protein-protein interaction databases

STRING335541.Swol_0343.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABI67684; ABI67684; Swol_0343.
GeneID4281337.
KEGGswo:Swol_0343.
PATRIC23855392. VBISynWol51738_0367.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG4252.
HOGENOMHOG000262814.
KOK01768.
OMATTISESY.
ProtClustDBCLSK848768.

Enzyme and pathway databases

BioCycSWOL335541:GHL1-358-MONOMER.

Family and domain databases

Gene3D3.30.70.1230. 1 hit.
InterProIPR001054. A/G_cyclase.
IPR007890. CHASE2.
[Graphical view]
PfamPF05226. CHASE2. 1 hit.
PF00211. Guanylate_cyc. 1 hit.
[Graphical view]
SMARTSM01080. CHASE2. 1 hit.
SM00044. CYCc. 1 hit.
[Graphical view]
SUPFAMSSF55073. A/G_cyclase. 1 hit.
PROSITEPS50125. GUANYLATE_CYCLASE_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ0B020_SYNWW
AccessionPrimary (citable) accession number: Q0B020
Entry history
Integrated into UniProtKB/TrEMBL: October 17, 2006
Last sequence update: October 17, 2006
Last modified: May 29, 2013
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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