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Protein
Submitted name:

Uncharacterized protein

Gene

Swol_0700

Organism
Syntrophomonas wolfei subsp. wolfei (strain DSM 2245B / Goettingen)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Enzyme and pathway databases

BioCyciSWOL335541:GHL1-720-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Ordered Locus Names:Swol_0700Imported
OrganismiSyntrophomonas wolfei subsp. wolfei (strain DSM 2245B / Goettingen)Imported
Taxonomic identifieri335541 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesSyntrophomonadaceaeSyntrophomonas
ProteomesiUP000001968 Componenti: Chromosome

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3K6QX-ray1.80A/B/C/D1-138[»]
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ0AZ30.

Family & Domainsi

Phylogenomic databases

eggNOGiNOG139971.
HOGENOMiHOG000262507.
OMAiYTFTANI.
OrthoDBiEOG60655X.

Family and domain databases

InterProiIPR024308. DUF3832.
[Graphical view]
PfamiPF12909. DUF3832. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q0AZ30-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQTINATEIR NNFSYYIDTV VRDKPIAVKR NRDVLLFFSE QIIKDLLQDL
60 70 80 90 100
KIHAELSKED GIIIGTIDGF DLVVSGESEQ EVIQKLAEDL LEYAQDYMND
110 120 130
FKLFYNAPNR KTHYPYILKV LLSSNIDEVK GYIYAEMV
Length:138
Mass (Da):16,045
Last modified:October 17, 2006 - v1
Checksum:i124AECFFF8C299E3
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000448 Genomic DNA. Translation: ABI68024.1.
RefSeqiWP_011640129.1. NC_008346.1.
YP_753395.1. NC_008346.1.

Genome annotation databases

EnsemblBacteriaiABI68024; ABI68024; Swol_0700.
KEGGiswo:Swol_0700.
PATRICi23856143. VBISynWol51738_0739.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000448 Genomic DNA. Translation: ABI68024.1.
RefSeqiWP_011640129.1. NC_008346.1.
YP_753395.1. NC_008346.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3K6QX-ray1.80A/B/C/D1-138[»]
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

DNASUi4283401.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABI68024; ABI68024; Swol_0700.
KEGGiswo:Swol_0700.
PATRICi23856143. VBISynWol51738_0739.

Phylogenomic databases

eggNOGiNOG139971.
HOGENOMiHOG000262507.
OMAiYTFTANI.
OrthoDBiEOG60655X.

Enzyme and pathway databases

BioCyciSWOL335541:GHL1-720-MONOMER.

Miscellaneous databases

EvolutionaryTraceiQ0AZ30.

Family and domain databases

InterProiIPR024308. DUF3832.
[Graphical view]
PfamiPF12909. DUF3832. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Crystal structure of Putative ligand binding protein (YP_753395.1) from Syntrophomonas wolfei str. Goettingen at 1.80 A resolution."
    Joint Center for Structural Genomics (JCSG)
    Submitted (OCT-2009) to the PDB data bank
    Cited for: X-RAY CRYSTALLOGRAPHY (1.80 ANGSTROMS).
  2. "The genome of Syntrophomonas wolfei: new insights into syntrophic metabolism and biohydrogen production."
    Sieber J.R., Sims D.R., Han C., Kim E., Lykidis A., Lapidus A.L., McDonnald E., Rohlin L., Culley D.E., Gunsalus R., McInerney M.J.
    Environ. Microbiol. 12:2289-2301(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 2245B / GoettingenImported.

Entry informationi

Entry nameiQ0AZ30_SYNWW
AccessioniPrimary (citable) accession number: Q0AZ30
Entry historyi
Integrated into UniProtKB/TrEMBL: October 17, 2006
Last sequence update: October 17, 2006
Last modified: April 1, 2015
This is version 43 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.