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Protein
Submitted name:

Putative methyl-accepting chemotaxis sensory transducer

Gene

Swol_0927

Organism
Syntrophomonas wolfei subsp. wolfei (strain DSM 2245B / Goettingen)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

BioCyciSWOL335541:GHL1-905-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative methyl-accepting chemotaxis sensory transducerImported
Gene namesi
Ordered Locus Names:Swol_0927Imported
OrganismiSyntrophomonas wolfei subsp. wolfei (strain DSM 2245B / Goettingen)Imported
Taxonomic identifieri335541 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesSyntrophomonadaceaeSyntrophomonas
Proteomesi
  • UP000001968 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei20 – 41HelicalSequence analysisAdd BLAST22
Transmembranei195 – 217HelicalSequence analysisAdd BLAST23

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

Interactioni

Protein-protein interaction databases

STRINGi335541.Swol_0927.

Structurei

3D structure databases

ProteinModelPortaliQ0AYG1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini215 – 267HAMPInterPro annotationAdd BLAST53
Domaini286 – 522Methyl-accepting transducerInterPro annotationAdd BLAST237

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG4105C8Q. Bacteria.
COG0840. LUCA.
HOGENOMiHOG000148080.
KOiK03406.
OMAiIEMEDAI.
OrthoDBiPOG091H0QRR.

Family and domain databases

CDDicd06225. HAMP. 1 hit.
InterProiIPR004090. Chemotax_Me-accpt_rcpt.
IPR003660. HAMP_dom.
IPR004089. MCPsignal_dom.
IPR033463. sCache_3.
IPR029151. Sensor-like.
[Graphical view]
PfamiPF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
PF17202. sCache_3_3. 1 hit.
[Graphical view]
PRINTSiPR00260. CHEMTRNSDUCR.
SMARTiSM00304. HAMP. 2 hits.
SM00283. MA. 1 hit.
[Graphical view]
SUPFAMiSSF103190. SSF103190. 1 hit.
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q0AYG1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSLMARVERL LRLLDVRLRL MLAFTLIVAA VTGLMGVYAT YVMSDKIVFT
60 70 80 90 100
AQEKLKSDLA LGRQIIELNF PGEWEVIDGK LYKGDVLMEE NYEVVDRIGK
110 120 130 140 150
LTGDTVTIFK GDTRISTNVM KDNQRQVGTQ VSEQVAEAVL KRGETYIGRA
160 170 180 190 200
NVVGTWNETA YEPIKNSAGQ TIGIWYVGVP ATPYDEAVGH FRNSMVTYSL
210 220 230 240 250
IGILIGFIAA FLIAASVHRP LDRIKSAVSE VSQGDLTQKV PVFAKDEPAQ
260 270 280 290 300
LALMVNLMVE KISELIGKTR QLAENVGEAS GILLKTCEMS TSQMQDMTIK
310 320 330 340 350
ANDMNNSATS QADLTGRSKV VIGEMSEVIQ QVARNSQEVS SSTMVANAKA
360 370 380 390 400
QEGEKQVEKA IEQMGVISHT VNSTAHIVQG LGEKSQEINQ IVDLITNIAN
410 420 430 440 450
QTNLLALNAA IEAARAGEQG KGFAVVAEEV RKLAEESGEA AKRIAGLIKE
460 470 480 490 500
VQNEAVRAVK AMEEGTKEVA YGTEAVASAG EAFEMIIKGV TEISEEIQEM
510 520 530 540 550
SAASEEMAAS AETALESIEK TSAAAEDNLG YTRMIGQLAE EQMASVEEVN
560 570
ASIESLNKIV IEMEDAISYF KV
Length:572
Mass (Da):61,994
Last modified:October 17, 2006 - v1
Checksum:iDBF24773464C137B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000448 Genomic DNA. Translation: ABI68243.1.
RefSeqiWP_011640348.1. NC_008346.1.

Genome annotation databases

EnsemblBacteriaiABI68243; ABI68243; Swol_0927.
KEGGiswo:Swol_0927.
PATRICi23856621. VBISynWol51738_0978.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000448 Genomic DNA. Translation: ABI68243.1.
RefSeqiWP_011640348.1. NC_008346.1.

3D structure databases

ProteinModelPortaliQ0AYG1.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi335541.Swol_0927.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABI68243; ABI68243; Swol_0927.
KEGGiswo:Swol_0927.
PATRICi23856621. VBISynWol51738_0978.

Phylogenomic databases

eggNOGiENOG4105C8Q. Bacteria.
COG0840. LUCA.
HOGENOMiHOG000148080.
KOiK03406.
OMAiIEMEDAI.
OrthoDBiPOG091H0QRR.

Enzyme and pathway databases

BioCyciSWOL335541:GHL1-905-MONOMER.

Family and domain databases

CDDicd06225. HAMP. 1 hit.
InterProiIPR004090. Chemotax_Me-accpt_rcpt.
IPR003660. HAMP_dom.
IPR004089. MCPsignal_dom.
IPR033463. sCache_3.
IPR029151. Sensor-like.
[Graphical view]
PfamiPF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
PF17202. sCache_3_3. 1 hit.
[Graphical view]
PRINTSiPR00260. CHEMTRNSDUCR.
SMARTiSM00304. HAMP. 2 hits.
SM00283. MA. 1 hit.
[Graphical view]
SUPFAMiSSF103190. SSF103190. 1 hit.
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ0AYG1_SYNWW
AccessioniPrimary (citable) accession number: Q0AYG1
Entry historyi
Integrated into UniProtKB/TrEMBL: October 17, 2006
Last sequence update: October 17, 2006
Last modified: November 2, 2016
This is version 65 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.