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Q0AYG1 (Q0AYG1_SYNWW) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 49. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
Ordered Locus Names:Swol_0927 EMBL ABI68243.1
OrganismSyntrophomonas wolfei subsp. wolfei (strain DSM 2245B / Goettingen) [Complete proteome] [HAMAP] EMBL ABI68243.1
Taxonomic identifier335541 [NCBI]
Taxonomic lineageBacteriaFirmicutesClostridiaClostridialesSyntrophomonadaceaeSyntrophomonas

Protein attributes

Sequence length572 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Ontologies

Keywords
   DomainSignal EMBL ABI68243.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processchemotaxis

Inferred from electronic annotation. Source: InterPro

   Cellular_componentintegral component of membrane

Inferred from electronic annotation. Source: InterPro

   Molecular_functionsignal transducer activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 4545 Potential EMBL ABI68243.1
Chain46 – 572527 Potential EMBL ABI68243.1
PRO_5000131307

Sequences

Sequence LengthMass (Da)Tools
Q0AYG1 [UniParc].

Last modified October 17, 2006. Version 1.
Checksum: DBF24773464C137B

FASTA57261,994
        10         20         30         40         50         60 
MSLMARVERL LRLLDVRLRL MLAFTLIVAA VTGLMGVYAT YVMSDKIVFT AQEKLKSDLA 

        70         80         90        100        110        120 
LGRQIIELNF PGEWEVIDGK LYKGDVLMEE NYEVVDRIGK LTGDTVTIFK GDTRISTNVM 

       130        140        150        160        170        180 
KDNQRQVGTQ VSEQVAEAVL KRGETYIGRA NVVGTWNETA YEPIKNSAGQ TIGIWYVGVP 

       190        200        210        220        230        240 
ATPYDEAVGH FRNSMVTYSL IGILIGFIAA FLIAASVHRP LDRIKSAVSE VSQGDLTQKV 

       250        260        270        280        290        300 
PVFAKDEPAQ LALMVNLMVE KISELIGKTR QLAENVGEAS GILLKTCEMS TSQMQDMTIK 

       310        320        330        340        350        360 
ANDMNNSATS QADLTGRSKV VIGEMSEVIQ QVARNSQEVS SSTMVANAKA QEGEKQVEKA 

       370        380        390        400        410        420 
IEQMGVISHT VNSTAHIVQG LGEKSQEINQ IVDLITNIAN QTNLLALNAA IEAARAGEQG 

       430        440        450        460        470        480 
KGFAVVAEEV RKLAEESGEA AKRIAGLIKE VQNEAVRAVK AMEEGTKEVA YGTEAVASAG 

       490        500        510        520        530        540 
EAFEMIIKGV TEISEEIQEM SAASEEMAAS AETALESIEK TSAAAEDNLG YTRMIGQLAE 

       550        560        570 
EQMASVEEVN ASIESLNKIV IEMEDAISYF KV 

« Hide

References

[1]"The genome of Syntrophomonas wolfei: new insights into syntrophic metabolism and biohydrogen production."
Sieber J.R., Sims D.R., Han C., Kim E., Lykidis A., Lapidus A.L., McDonnald E., Rohlin L., Culley D.E., Gunsalus R., McInerney M.J.
Environ. Microbiol. 12:2289-2301(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 2245B / Goettingen.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000448 Genomic DNA. Translation: ABI68243.1.
RefSeqYP_753614.1. NC_008346.1.

3D structure databases

ProteinModelPortalQ0AYG1.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING335541.Swol_0927.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABI68243; ABI68243; Swol_0927.
GeneID4282869.
KEGGswo:Swol_0927.
PATRIC23856621. VBISynWol51738_0978.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0840.
HOGENOMHOG000148080.
KOK03406.
OMAGRIGRIM.
OrthoDBEOG62NX2Z.

Enzyme and pathway databases

BioCycSWOL335541:GHL1-947-MONOMER.

Family and domain databases

InterProIPR004090. Chemotax_Me-accpt_rcpt.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
IPR029151. Sensor-like.
[Graphical view]
PfamPF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
PRINTSPR00260. CHEMTRNSDUCR.
SMARTSM00304. HAMP. 2 hits.
SM00283. MA. 1 hit.
[Graphical view]
SUPFAMSSF103190. SSF103190. 1 hit.
PROSITEPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ0AYG1_SYNWW
AccessionPrimary (citable) accession number: Q0AYG1
Entry history
Integrated into UniProtKB/TrEMBL: October 17, 2006
Last sequence update: October 17, 2006
Last modified: June 11, 2014
This is version 49 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)