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Protein
Submitted name:

Methyl-accepting chemotaxis sensory transducer

Gene

Swol_0971

Organism
Syntrophomonas wolfei subsp. wolfei (strain DSM 2245B / Goettingen)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Enzyme and pathway databases

BioCyciSWOL335541:GHL1-1000-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Methyl-accepting chemotaxis sensory transducerImported
Gene namesi
Ordered Locus Names:Swol_0971Imported
OrganismiSyntrophomonas wolfei subsp. wolfei (strain DSM 2245B / Goettingen)Imported
Taxonomic identifieri335541 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesSyntrophomonadaceaeSyntrophomonas
Proteomesi
  • UP000001968 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei6 – 2722HelicalSequence analysisAdd
BLAST
Transmembranei282 – 30019HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

Interactioni

Protein-protein interaction databases

STRINGi335541.Swol_0971.

Structurei

3D structure databases

ProteinModelPortaliQ0AYB8.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini301 – 35353HAMPInterPro annotationAdd
BLAST
Domaini372 – 608237Methyl-accepting transducerInterPro annotationAdd
BLAST

Coiled coil

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Coiled coili422 – 44928Sequence analysisAdd
BLAST

Keywords - Domaini

Coiled coilSequence analysis, Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG4105C8Q. Bacteria.
COG0840. LUCA.
OMAiIARMEHI.
OrthoDBiPOG091H0QRR.

Family and domain databases

CDDicd06225. HAMP. 1 hit.
InterProiIPR025991. Chemoreceptor_zinc-bind_dom.
IPR029150. dCache_3.
IPR003660. HAMP_dom.
IPR004089. MCPsignal_dom.
IPR029151. Sensor-like.
[Graphical view]
PfamiPF13682. CZB. 1 hit.
PF14827. dCache_3. 1 hit.
PF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
SMARTiSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
SUPFAMiSSF103190. SSF103190. 1 hit.
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q0AYB8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVQRSLKTRI ILMLVIFNLL VFGFFYWNSL MLQRMLVKDF EKEYIAQTSD
60 70 80 90 100
TVAECVRDAE KEAQILSNSL FANAAIKEAF IQQDRAELLG LVLPVYEQWQ
110 120 130 140 150
KDHHISQLNF FSADGTAILR AQKPEQYGDD VSYRKALARV IQSRQQVMAA
160 170 180 190 200
EKGVTGFGIR CLNPLVVEDR LVGIYEVGIS LEEAVGEALS ELQQGKYGIL
210 220 230 240 250
ALEKQESSVL WQSSALGVNP EAADLEKLEQ GNSLSRKTSD NRVILTLVPI
260 270 280 290 300
KDVEGNAIAF VQGEIPRDTF IQAENRAKSR SLLIVIVSLL LVCIIAYLVL
310 320 330 340 350
NRALRHLQPL RDSMVRVGEG DLTAVIDLSS KDEIGKLAHG FSDLLERFRE
360 370 380 390 400
VMYALFAKSS NLTTNAYFLN DVASSSVVKL GQTAEQLDYV GGQLQGAGQN
410 420 430 440 450
LREADTGVEE IAGASSMVAE QAQNLQETYM KLSQAAQEGK EEMKRFEEVG
460 470 480 490 500
QLLKERGEST VHSARELEKI SRDIGEITST IMSVSEQTNL LALNAAIESA
510 520 530 540 550
RAGEHGRGFA VVAEEIRKLA EQTAGYTRQI SSLISGVQGN IGNFVVEIES
560 570 580 590 600
MGTAIEEENQ TTSRVIARME HIIRQIVNIQ DAVMDISSAM QEQSAASQEI
610 620 630 640 650
SAVVSTVNDN MLLLISNLDQ IIEDINQQMD NFSAIVDIAG ETNDISQAFR
660 670 680 690 700
DILEQYRLPD KVVLRQVIDD HHGFVRKYQF IVEHNLFAEP DSVPTHMQCR
710 720 730 740 750
LARWFKSVQD KGTLELYQQL AANPHEQVHT LAREAIQANN QGHKDEARAH
760 770
IQAMIAASDK IIAALEQLIA FKSNEGN
Length:777
Mass (Da):86,341
Last modified:October 17, 2006 - v1
Checksum:i83433AB84393DE9E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000448 Genomic DNA. Translation: ABI68286.1.
RefSeqiWP_011640391.1. NC_008346.1.

Genome annotation databases

EnsemblBacteriaiABI68286; ABI68286; Swol_0971.
KEGGiswo:Swol_0971.
PATRICi23856723. VBISynWol51738_1026.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000448 Genomic DNA. Translation: ABI68286.1.
RefSeqiWP_011640391.1. NC_008346.1.

3D structure databases

ProteinModelPortaliQ0AYB8.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi335541.Swol_0971.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABI68286; ABI68286; Swol_0971.
KEGGiswo:Swol_0971.
PATRICi23856723. VBISynWol51738_1026.

Phylogenomic databases

eggNOGiENOG4105C8Q. Bacteria.
COG0840. LUCA.
OMAiIARMEHI.
OrthoDBiPOG091H0QRR.

Enzyme and pathway databases

BioCyciSWOL335541:GHL1-1000-MONOMER.

Family and domain databases

CDDicd06225. HAMP. 1 hit.
InterProiIPR025991. Chemoreceptor_zinc-bind_dom.
IPR029150. dCache_3.
IPR003660. HAMP_dom.
IPR004089. MCPsignal_dom.
IPR029151. Sensor-like.
[Graphical view]
PfamiPF13682. CZB. 1 hit.
PF14827. dCache_3. 1 hit.
PF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
SMARTiSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
SUPFAMiSSF103190. SSF103190. 1 hit.
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ0AYB8_SYNWW
AccessioniPrimary (citable) accession number: Q0AYB8
Entry historyi
Integrated into UniProtKB/TrEMBL: October 17, 2006
Last sequence update: October 17, 2006
Last modified: September 7, 2016
This is version 63 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.