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Q0AXX1 (Q0AXX1_SYNWW) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 46. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length309 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Sequences

Sequence LengthMass (Da)Tools
Q0AXX1 [UniParc].

Last modified October 17, 2006. Version 1.
Checksum: 5476FCB358EE3216

FASTA30934,890
        10         20         30         40         50         60 
MEIFLREIRS MDPINCEQAF DSDDFLYQVK WDGVRMLVAV AGEQVSLLNK RGNLRSRQYP 

        70         80         90        100        110        120 
ELQNLPNLIR ASTAVLDGEI VVLREGKPSF PAVMQRDNCR NPMKIQHLSK TLAISYMVFD 

       130        140        150        160        170        180 
LLYLNGRDLR SASLVDRLSQ LAELFDNQGC LYLVESFSQG TILFDSVQRA GLEGIVAKKK 

       190        200        210        220        230        240 
NSFYRPGKQH DDWFKIKCRC SQACLVGGYT LRGKQVNALL LGVMRDGSLS FAGKASNGLD 

       250        260        270        280        290        300 
AEQLQILSET LPRLEVKDSP FLEPTPAGSH YITPQLAVEV EYLEWTDSLH LRFPVIKSFI 


KNTEADYSV 

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References

[1]"The genome of Syntrophomonas wolfei: new insights into syntrophic metabolism and biohydrogen production."
Sieber J.R., Sims D.R., Han C., Kim E., Lykidis A., Lapidus A.L., McDonnald E., Rohlin L., Culley D.E., Gunsalus R., McInerney M.J.
Environ. Microbiol. 12:2289-2301(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 2245B / Goettingen.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000448 Genomic DNA. Translation: ABI68433.1.
RefSeqYP_753804.1. NC_008346.1.

3D structure databases

ProteinModelPortalQ0AXX1.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING335541.Swol_1123.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABI68433; ABI68433; Swol_1123.
GeneID4282959.
KEGGswo:Swol_1123.
PATRIC23857061. VBISynWol51738_1192.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1793.
HOGENOMHOG000222509.
KOK01971.
OMAVEVKYGQ.
OrthoDBEOG6BW4VZ.

Enzyme and pathway databases

BioCycSWOL335541:GHL1-1154-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR02779. NHEJ_ligase_lig. 1 hit.
PROSITEPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ0AXX1_SYNWW
AccessionPrimary (citable) accession number: Q0AXX1
Entry history
Integrated into UniProtKB/TrEMBL: October 17, 2006
Last sequence update: October 17, 2006
Last modified: November 13, 2013
This is version 46 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)