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Protein
Submitted name:

Uncharacterized protein

Gene

Swol_1228

Organism
Syntrophomonas wolfei subsp. wolfei (strain DSM 2245B / Goettingen)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.SAAS annotation

Caution

Lacks conserved residue(s) required for the propagation of feature annotation.PROSITE-ProRule annotation

Catalytic activityi

S-adenosyl-L-methionine + cytosine(967) in 16S rRNA = S-adenosyl-L-homocysteine + 5-methylcytosine(967) in 16S rRNA.SAAS annotation

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Binding sitei291S-adenosyl-L-methioninePROSITE-ProRule annotation1
Binding sitei318S-adenosyl-L-methioninePROSITE-ProRule annotation1
Binding sitei335S-adenosyl-L-methioninePROSITE-ProRule annotation1
Active sitei388NucleophilePROSITE-ProRule annotation1

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionMethyltransferasePROSITE-ProRule annotationSAAS annotation, RNA-bindingPROSITE-ProRule annotationSAAS annotation, Transferase
Biological processrRNA processingSAAS annotation
LigandS-adenosyl-L-methioninePROSITE-ProRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Ordered Locus Names:Swol_1228Imported
OrganismiSyntrophomonas wolfei subsp. wolfei (strain DSM 2245B / Goettingen)Imported
Taxonomic identifieri335541 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesSyntrophomonadaceaeSyntrophomonas
Proteomesi

Subcellular locationi

  • Cytoplasm SAAS annotation

GO - Cellular componenti

Keywords - Cellular componenti

CytoplasmSAAS annotation

Interactioni

Protein-protein interaction databases

STRINGi335541.Swol_1228

Structurei

3D structure databases

ProteinModelPortaliQ0AXL7
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini176 – 456SAM_MT_RSMB_NOPInterPro annotationAdd BLAST281

Sequence similaritiesi

Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.PROSITE-ProRule annotationSAAS annotation

Phylogenomic databases

eggNOGiENOG4105CYJ Bacteria
COG0144 LUCA
HOGENOMiHOG000037300
KOiK03500
OMAiLRVNRQH
OrthoDBiPOG091H02E2

Family and domain databases

Gene3Di1.10.940.10, 1 hit
InterProiView protein in InterPro
IPR031341 Methyltr_RsmF_N
IPR001678 MeTrfase_RsmB/NOP2
IPR035926 NusB-like_sf
IPR006027 NusB_RsmB_TIM44
IPR023267 RCMT
IPR004573 rRNA_ssu_MeTfrase_B
IPR029063 SAM-dependent_MTases
PfamiView protein in Pfam
PF01189 Methyltr_RsmB-F, 1 hit
PF17125 Methyltr_RsmF_N, 1 hit
PF01029 NusB, 1 hit
PRINTSiPR02008 RCMTFAMILY
SUPFAMiSSF48013 SSF48013, 1 hit
SSF53335 SSF53335, 1 hit
TIGRFAMsiTIGR00563 rsmB, 1 hit
PROSITEiView protein in PROSITE
PS51686 SAM_MT_RSMB_NOP, 1 hit

Sequencei

Sequence statusi: Complete.

Q0AXL7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAIKKDKAVN KARIMAAEIV YEVMERGAFA NLALAKALRN SDLSAADRHL
60 70 80 90 100
LTEIVNGTVR MIKHLDWVLE LFLHSPIKKQ NPYLLSILRT ALYQLMFLAK
110 120 130 140 150
VPDYALVNDA VEISRQKMGA KMAGVSNAVL RNIIRKLDKI KYPDDPVSFY
160 170 180 190 200
SIYYSHPDWL VKLWLDTLGT QACETLLAYN NSRSRVVLRC NPLKCSREEL
210 220 230 240 250
IDKLEEEGVK AQLSPLTPWG IVVEDNPQPI AETASFKKGY FYIQNEASML
260 270 280 290 300
AAAILNPPAG ERVLDLCCGV GGKTTHLAEY MNNQGEVLAV EFYAQKLELL
310 320 330 340 350
RQNCQRLGLG IVKDLEKDIR TLNSKEVKAR YLLLDAPCSG WGVLNRRADA
360 370 380 390 400
RWRKNQEEIN ELTQLQAQFI SHAATMVEKQ GYLLYATCTI NQAENEEIIE
410 420 430 440 450
GFLEENQHFV LEGFLSKLSF FPLDKPDKAS ANRGMLTLMP GKYGTDGMFY

ALLRRK
Length:456
Mass (Da):51,585
Last modified:October 17, 2006 - v1
Checksum:iE99FB710921033F6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000448 Genomic DNA Translation: ABI68537.1

Genome annotation databases

EnsemblBacteriaiABI68537; ABI68537; Swol_1228
KEGGiswo:Swol_1228

Similar proteinsi

Entry informationi

Entry nameiQ0AXL7_SYNWW
AccessioniPrimary (citable) accession number: Q0AXL7
Entry historyiIntegrated into UniProtKB/TrEMBL: October 17, 2006
Last sequence update: October 17, 2006
Last modified: May 23, 2018
This is version 84 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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